RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 KBTBD3Q8NAB2 608 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 STRBPQ96SI9 672 aaKnown RBP19.5■□□□□ 0.71
HIF3A-208ENST00000524533 PLXNA1Q9UIW2 1896 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 ZNFX1Q9P2E3 1918 aaKnown RBP19.49■□□□□ 0.71
HIF3A-208ENST00000524533 ATN1P54259 1190 aaPredicted RBP19.49■□□□□ 0.71
HIF3A-208ENST00000524533 LRIT3Q3SXY7 679 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 SBK1Q52WX2 424 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 APPBP2Q92624 585 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 MAML3Q96JK9 1138 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 FBXO28Q9NVF7 368 aa19.49■□□□□ 0.71
HIF3A-208ENST00000524533 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 KBTBD13C9JR72 458 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 SEPT4O43236 478 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 MDM2Q00987 491 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-208ENST00000524533 FAM83BQ5T0W9 1011 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 GJC2Q5T442 439 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-208ENST00000524533 ANO1Q5XXA6 986 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 TSHZ3Q63HK5 1081 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 GIMAP6Q6P9H5 292 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 ARRDC4Q8NCT1 418 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 MMP19Q99542 508 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 PPP1R9AQ9ULJ8 1098 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 ADAMTS5Q9UNA0 930 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 LTBP2Q14767 1821 aa19.48■□□□□ 0.71
HIF3A-208ENST00000524533 MYH4Q9Y623 1939 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 VWA5AO00534 786 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 RASA1P20936 1047 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 GPR153Q6NV75 609 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 RIOX2Q8IUF8 465 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 STK11IPQ8N1F8 1099 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 OSBP2Q969R2 916 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.47■□□□□ 0.71
HIF3A-208ENST00000524533 MKNK2Q9HBH9 465 aa19.47■□□□□ 0.71
HIF3A-208ENST00000524533 MINDY4BA8MYZ0 360 aa19.46■□□□□ 0.71
HIF3A-208ENST00000524533 RNF113AO15541 343 aaKnown RBP19.46■□□□□ 0.71
HIF3A-208ENST00000524533 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
HIF3A-208ENST00000524533 ZFYP08048 801 aaPredicted RBP19.46■□□□□ 0.71
HIF3A-208ENST00000524533 COPB2P35606 906 aa19.46■□□□□ 0.71
HIF3A-208ENST00000524533 RTP1P59025 263 aa19.46■□□□□ 0.71
HIF3A-208ENST00000524533 KCTD2Q14681 263 aa19.46■□□□□ 0.71
HIF3A-208ENST00000524533 PRAMEF19Q5SWL8 479 aa19.46■□□□□ 0.71
HIF3A-208ENST00000524533 ZNF214Q9UL59 606 aaPredicted RBP19.46■□□□□ 0.71
HIF3A-208ENST00000524533 GPAA1O43292 621 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 PGK2P07205 417 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 GNAT2P19087 354 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 STAT3P40763 770 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 TDO2P48775 406 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 LBHD1Q9BQE6 289 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-208ENST00000524533 EPB41L4AQ9HCS5 686 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-208ENST00000524533 NYAP2Q9P242 653 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 PRKAG2Q9UGJ0 569 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 ATP11BQ9Y2G3 1177 aa19.45■□□□□ 0.7
HIF3A-208ENST00000524533 M0R2C6 588 aa19.44■□□□□ 0.7
HIF3A-208ENST00000524533 LRRFIP1Q32MZ4 808 aaKnown RBP19.44■□□□□ 0.7
HIF3A-208ENST00000524533 FAM47AQ5JRC9 791 aa19.44■□□□□ 0.7
HIF3A-208ENST00000524533 DEFB123Q8N688 67 aa19.44■□□□□ 0.7
HIF3A-208ENST00000524533 REPS2Q8NFH8 660 aa19.44■□□□□ 0.7
HIF3A-208ENST00000524533 NUP88Q99567 741 aaPredicted RBP19.44■□□□□ 0.7
HIF3A-208ENST00000524533 SLF1Q9BQI6 1058 aa19.44■□□□□ 0.7
HIF3A-208ENST00000524533 APPP05067 770 aa19.43■□□□□ 0.7
HIF3A-208ENST00000524533 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
HIF3A-208ENST00000524533 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
HIF3A-208ENST00000524533 DIS3Q9Y2L1 958 aaKnown RBP19.43■□□□□ 0.7
HIF3A-208ENST00000524533 TTC41PQ6P2S7 1318 aa19.43■□□□□ 0.7
HIF3A-208ENST00000524533 F5H6K3 240 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 NDUFB10O96000 172 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 KLRC3Q07444 240 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 LRRC41Q15345 812 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 ZNF792Q3KQV3 632 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 SLC39A5Q6ZMH5 540 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 Q7L0L9 218 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 TINF2Q9BSI4 451 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 TEX13BQ9BXU2 312 aa19.42■□□□□ 0.7
HIF3A-208ENST00000524533 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 ERC2O15083 957 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 PRDM1O75626 825 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 RARBP10826 455 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 ADCYAP1R1P41586 468 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 SNRNP48Q6IEG0 339 aaKnown RBP19.41■□□□□ 0.7
HIF3A-208ENST00000524533 ZNF444Q8N0Y2 327 aaPredicted RBP19.41■□□□□ 0.7
HIF3A-208ENST00000524533 XPNPEP3Q9NQH7 507 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 CLIP2Q9UDT6 1046 aa19.41■□□□□ 0.7
HIF3A-208ENST00000524533 SNX17Q15036 470 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 TRIM60Q495X7 471 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 IFNL3Q8IZI9 196 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 PRPF38AQ8NAV1 312 aaKnown RBP19.4■□□□□ 0.7
HIF3A-208ENST00000524533 FERMT2Q96AC1 680 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 FSD1Q9BTV5 496 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 PRDM5Q9NQX1 630 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-208ENST00000524533 COL6A3P12111 3177 aa19.4■□□□□ 0.7
HIF3A-208ENST00000524533 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
HIF3A-208ENST00000524533 AKR1A1P14550 325 aa19.39■□□□□ 0.69
HIF3A-208ENST00000524533 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
HIF3A-208ENST00000524533 PI4K2BQ8TCG2 481 aa19.39■□□□□ 0.69
HIF3A-208ENST00000524533 CEP95Q96GE4 821 aa19.39■□□□□ 0.69
HIF3A-208ENST00000524533 CNPY2Q9Y2B0 182 aa19.39■□□□□ 0.69
HIF3A-208ENST00000524533 CTDP1Q9Y5B0 961 aaPredicted RBP19.39■□□□□ 0.69
HIF3A-208ENST00000524533 PLIN4Q96Q06 1357 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms