RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 NSUN7Q8NE18 718 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 MTA3Q9BTC8 594 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 GZF1Q9H116 711 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 ANAPC4Q9UJX5 808 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 B4E1Z4 1266 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 LDHCP07864 332 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 SRGNP10124 158 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 PCP11498 1178 aaKnown RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 IL1R1P14778 569 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 ALDH1B1P30837 517 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 DYNLL1P63167 89 aaKnown RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CTDSPL2Q05D32 466 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 SART3Q15020 963 aaKnown RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 L1TD1Q5T7N2 865 aaKnown RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CYB5R4Q7L1T6 521 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 SLC51AQ86UW1 340 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 ZNF384Q8TF68 577 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 MASTLQ96GX5 879 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 INSM2Q96T92 566 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CD209Q9NNX6 404 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 CUEDC1Q9NWM3 386 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-211ENST00000523062 ATP6V0A2Q9Y487 856 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 KIAA1551Q9HCM1 1747 aa8.02□□□□□ -1.13
CSMD1-211ENST00000523062 LTBP1Q14766 1721 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 QSER1Q2KHR3 1735 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 ERICH2A1L162 156 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 H3BQV1 296 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CPLX1O14810 134 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 IFIT3O14879 490 aaKnown RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CDKL5O76039 1030 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CTDNEP1O95476 244 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 LIFRP42702 1097 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 SLC15A2Q16348 729 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 MSL1Q68DK7 614 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 FOXR1Q6PIV2 292 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CPLX2Q6PUV4 134 aaKnown RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 SGMS1Q86VZ5 419 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 RNF217Q8TC41 542 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 TBC1D22AQ8WUA7 517 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 SDR42E1Q8WUS8 393 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 ESR2Q92731 530 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 DDX11Q96FC9 970 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CHAMP1Q96JM3 812 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CAMKK2Q96RR4 588 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 NOL10Q9BSC4 688 aaKnown RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 BEGAINQ9BUH8 593 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 TMX4Q9H1E5 349 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 TOMM22Q9NS69 142 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 ATP8A2Q9NTI2 1148 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 AATFQ9NY61 560 aaKnown RBP eCLIP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 ARPP21Q9UBL0 812 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-211ENST00000523062 POLLQ9UGP5 575 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CNPY2Q9Y2B0 182 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 CHD4Q14839 1912 aa8.01□□□□□ -1.13
CSMD1-211ENST00000523062 COL11A2P13942 1736 aaPredicted RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 CCDC88AQ3V6T2 1871 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 NID2Q14112 1375 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 FSD2A1L4K1 749 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 KRBA1A5PL33 1030 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 GOLGA6L3A6NEY3 463 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 CCDC69A6NI79 296 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 GOLGA8AA7E2F4 631 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 MINDY4BA8MYZ0 360 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 FIBPO43427 364 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 BAG3O95817 575 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 SLC3A2P08195 630 aaKnown RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 NT5C2P49902 561 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 METAP2P50579 478 aaKnown RBP eCLIP8□□□□□ -1.13
CSMD1-211ENST00000523062 RCAN1P53805 252 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 KRT85P78386 507 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 RESTQ13127 1097 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 SF3B2Q13435 895 aaKnown RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 EZH2Q15910 746 aaKnown RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 RRP12Q5JTH9 1297 aaKnown RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 STYK1Q6J9G0 422 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 APOA5Q6Q788 366 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 SYNE3Q6ZMZ3 975 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 USP48Q86UV5 1035 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 TMTC2Q8N394 836 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms