RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 CNGA1P29973 690 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 SNX17Q15036 470 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 REPS2Q8NFH8 660 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 MAML3Q96JK9 1138 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 KANSL2Q9H9L4 492 aa14.18□□□□□ -0.14
POLB-208ENST00000520008 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
POLB-208ENST00000520008 ZNF214Q9UL59 606 aaPredicted RBP14.18□□□□□ -0.14
POLB-208ENST00000520008 SMARCA5O60264 1052 aaPredicted RBP14.17□□□□□ -0.14
POLB-208ENST00000520008 SLC25A27O95847 323 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 MDM2Q00987 491 aaPredicted RBP14.17□□□□□ -0.14
POLB-208ENST00000520008 SBK1Q52WX2 424 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 ZSCAN25Q6NSZ9 544 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 Q7L0L9 218 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 NCAPG2Q86XI2 1143 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 STRBPQ96SI9 672 aaKnown RBP14.17□□□□□ -0.14
POLB-208ENST00000520008 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 FBXO28Q9NVF7 368 aa14.17□□□□□ -0.14
POLB-208ENST00000520008 GSG1L2A8MUP6 293 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 VWA5AO00534 786 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 FCER1AP12319 257 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
POLB-208ENST00000520008 RTP1P59025 263 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 PLS1Q14651 629 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 GJC2Q5T442 439 aaPredicted RBP14.16□□□□□ -0.14
POLB-208ENST00000520008 RIOX2Q8IUF8 465 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 KBTBD3Q8NAB2 608 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 ARRDC4Q8NCT1 418 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 MTMR10Q9NXD2 777 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 SLC5A4Q9NY91 659 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 PPP1R9AQ9ULJ8 1098 aa14.16□□□□□ -0.14
POLB-208ENST00000520008 LAMA2P24043 3122 aaKnown RBP14.15□□□□□ -0.14
POLB-208ENST00000520008 CDH23Q9H251 3354 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 RASA1P20936 1047 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 FAM47AQ5JRC9 791 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 PRAMEF19Q5SWL8 479 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 ANO1Q5XXA6 986 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 GIMAP6Q6P9H5 292 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 SLC39A5Q6ZMH5 540 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 DCTPP1Q9H773 170 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
POLB-208ENST00000520008 GOPCQ9HD26 462 aa14.15□□□□□ -0.14
POLB-208ENST00000520008 DIS3Q9Y2L1 958 aaKnown RBP14.15□□□□□ -0.14
POLB-208ENST00000520008 MYH4Q9Y623 1939 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 LRRC41Q15345 812 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 ZNF792Q3KQV3 632 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 APPBP2Q92624 585 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
POLB-208ENST00000520008 KBTBD13C9JR72 458 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 PGK2P07205 417 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 STAT3P40763 770 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 SLC17A8Q8NDX2 589 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 MMP19Q99542 508 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 TINF2Q9BSI4 451 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 SMCHD1A6NHR9 2005 aa14.13□□□□□ -0.15
POLB-208ENST00000520008 UNC80Q8N2C7 3258 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 PLIN4Q96Q06 1357 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 ATP2A1O14983 1001 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 RNF113AO15541 343 aaKnown RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 ZNF865P0CJ78 1059 aaPredicted RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 COPB2P35606 906 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 KCTD2Q14681 263 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 TRIM60Q495X7 471 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 TSHZ3Q63HK5 1081 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 FAM109BQ6ICB4 259 aaPredicted RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
POLB-208ENST00000520008 NUP88Q99567 741 aaPredicted RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 LBHD1Q9BQE6 289 aaPredicted RBP14.12□□□□□ -0.15
POLB-208ENST00000520008 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 PHF24Q9UPV7 400 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 ATP11BQ9Y2G3 1177 aa14.12□□□□□ -0.15
POLB-208ENST00000520008 DNAJC25-GNG10A0A024R161 153 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 F5H6K3 240 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 M0R2C6 588 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 GPAA1O43292 621 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 NDUFB10O96000 172 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 ZFYP08048 801 aaPredicted RBP14.11□□□□□ -0.15
POLB-208ENST00000520008 TAL1P17542 331 aaPredicted RBP14.11□□□□□ -0.15
POLB-208ENST00000520008 ADCYAP1R1P41586 468 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 KLRC3Q07444 240 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
POLB-208ENST00000520008 MKL1Q969V6 931 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 TEX13BQ9BXU2 312 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 XPNPEP3Q9NQH7 507 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 PRKAG2Q9UGJ0 569 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 RIPK3Q9Y572 518 aa14.11□□□□□ -0.15
POLB-208ENST00000520008 ADAMTS4O75173 837 aa14.1□□□□□ -0.15
POLB-208ENST00000520008 RARBP10826 455 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms