RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
PVT1-208ENST00000519481 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
PVT1-208ENST00000519481 MYH7P12883 1935 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 ALPK3Q96L96 1907 aa13□□□□□ -0.33
PVT1-208ENST00000519481 KBTBD13C9JR72 458 aa13□□□□□ -0.33
PVT1-208ENST00000519481 DNM1LO00429 736 aa13□□□□□ -0.33
PVT1-208ENST00000519481 RNF113AO15541 343 aaKnown RBP13□□□□□ -0.33
PVT1-208ENST00000519481 APPP05067 770 aa13□□□□□ -0.33
PVT1-208ENST00000519481 CYBAP13498 195 aa13□□□□□ -0.33
PVT1-208ENST00000519481 MAGEA10P43363 369 aaPredicted RBP13□□□□□ -0.33
PVT1-208ENST00000519481 TDO2P48775 406 aa13□□□□□ -0.33
PVT1-208ENST00000519481 LRRC26Q2I0M4 334 aa13□□□□□ -0.33
PVT1-208ENST00000519481 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
PVT1-208ENST00000519481 MMP19Q99542 508 aa13□□□□□ -0.33
PVT1-208ENST00000519481 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
PVT1-208ENST00000519481 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
PVT1-208ENST00000519481 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
PVT1-208ENST00000519481 RANBP2P49792 3224 aaKnown RBP13□□□□□ -0.33
PVT1-208ENST00000519481 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 SEPT4O43236 478 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 GPAA1O43292 621 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 COBLO75128 1261 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 STAT3P40763 770 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 KCTD2Q14681 263 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 RIOX2Q8IUF8 465 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 TDHQ8IZJ6 230 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
PVT1-208ENST00000519481 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 VWA5AO00534 786 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
PVT1-208ENST00000519481 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
PVT1-208ENST00000519481 RASA1P20936 1047 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 ATN1P54259 1190 aaPredicted RBP12.98□□□□□ -0.33
PVT1-208ENST00000519481 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 TRPV1Q8NER1 839 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 MAML3Q96JK9 1138 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 NRBP1Q9UHY1 535 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 ADAMTS5Q9UNA0 930 aa12.98□□□□□ -0.33
PVT1-208ENST00000519481 PATL2C9JE40 543 aaKnown RBP12.97□□□□□ -0.33
PVT1-208ENST00000519481 F5H6K3 240 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 IGHA2P01877 340 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 KLRC3Q07444 240 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
PVT1-208ENST00000519481 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
PVT1-208ENST00000519481 DIS3Q9Y2L1 958 aaKnown RBP12.97□□□□□ -0.33
PVT1-208ENST00000519481 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 ROBO3Q96MS0 1386 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 RLFQ13129 1914 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 SOX1O00570 391 aaPredicted RBP12.96□□□□□ -0.33
PVT1-208ENST00000519481 ZBED4O75132 1171 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 RTP1P59025 263 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
PVT1-208ENST00000519481 PDE4BQ07343 736 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 LRIT3Q3SXY7 679 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 PRAMEF19Q5SWL8 479 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 ANO1Q5XXA6 986 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 PRPF38AQ8NAV1 312 aaKnown RBP12.96□□□□□ -0.33
PVT1-208ENST00000519481 FSD1Q9BTV5 496 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.33
PVT1-208ENST00000519481 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 ATP11BQ9Y2G3 1177 aa12.96□□□□□ -0.33
PVT1-208ENST00000519481 M0R2C6 588 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 NDUFB10O96000 172 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 RARBP10826 455 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
PVT1-208ENST00000519481 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 NAPBQ9H115 298 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
PVT1-208ENST00000519481 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
PVT1-208ENST00000519481 SYNPO2Q9UMS6 1093 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 CNPY2Q9Y2B0 182 aa12.95□□□□□ -0.34
PVT1-208ENST00000519481 PRDM1O75626 825 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 TTLL1O95922 423 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 PGK2P07205 417 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 LRRC41Q15345 812 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 ZNF792Q3KQV3 632 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
PVT1-208ENST00000519481 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 RNF180Q86T96 592 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
PVT1-208ENST00000519481 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms