RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 SYNPO2Q9UMS6 1093 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 FRMPD3Q5JV73 1810 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 VWA5AO00534 786 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 STRNO43815 780 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 PDE4BQ07343 736 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 PLS1Q14651 629 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 LHX8Q68G74 356 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 MKL1Q969V6 931 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 LNPKQ9C0E8 428 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 MROH8Q9H579 483 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMGXB3-205ENST00000514469 A0A0D9SFI3 127 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 F5H6K3 240 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 RAD21O60216 631 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 SLC25A27O95847 323 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 NDUFB10O96000 172 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 IGHDP01880 384 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 KLRC3Q07444 240 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 OLFML2BQ68BL8 750 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 COL11A1P12107 1806 aaPredicted RBP12.45□□□□□ -0.42
HMGXB3-205ENST00000514469 ZMYM6O95789 1325 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 COBLO75128 1261 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 TTLL1O95922 423 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 TSPY3P0CV98 308 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 TSPY8P0CW00 308 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 CYBAP13498 195 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 CYP2C19P33261 490 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 NUCB1Q02818 461 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 VPS53Q5VIR6 699 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 DPP9Q86TI2 863 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 GMCL1P1Q8NEA9 526 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 SLF1Q9BQI6 1058 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 ANAPC4Q9UJX5 808 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 ALPK3Q96L96 1907 aa12.44□□□□□ -0.42
HMGXB3-205ENST00000514469 PFASO15067 1338 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 EVI5O60447 810 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 COL6A1P12109 1028 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 COPB2P35606 906 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 TFAP4Q01664 338 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 ALX1Q15699 326 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 B4GALNT3Q6L9W6 998 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 RANBP2P49792 3224 aaKnown RBP12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
HMGXB3-205ENST00000514469 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 MSCO60682 206 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 FCER1AP12319 257 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 STAT3P40763 770 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 CTDSPL2Q05D32 466 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 MCMDC2Q4G0Z9 681 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 MMP19Q99542 508 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 SLC5A4Q9NY91 659 aa12.42□□□□□ -0.42
HMGXB3-205ENST00000514469 CCDC171Q6TFL3 1326 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 TSPY2A6NKD2 308 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 ORC4O43929 436 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 FGRP09769 529 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms