RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
CCHCR1-229ENST00000512418 DNM1LO00429 736 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 GPAA1O43292 621 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 COBLO75128 1261 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 FCER1AP12319 257 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 RASA1P20936 1047 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 TMEM132BQ14DG7 1078 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 LRRC26Q2I0M4 334 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 MKNK2Q9HBH9 465 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 FBXO28Q9NVF7 368 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 PPP1R9AQ9ULJ8 1098 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 TTC41PQ6P2S7 1318 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 COL11A1P12107 1806 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 DNAH12Q6ZR08 3092 aa17.6■□□□□ 0.41
CCHCR1-229ENST00000512418 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
CCHCR1-229ENST00000512418 RAD21O60216 631 aa17.59■□□□□ 0.41
CCHCR1-229ENST00000512418 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-229ENST00000512418 TDO2P48775 406 aa17.59■□□□□ 0.41
CCHCR1-229ENST00000512418 EPB41L4AQ9HCS5 686 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-229ENST00000512418 VWA5AO00534 786 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 ERC2O15083 957 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 SEPT4O43236 478 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 FAM83BQ5T0W9 1011 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 RIOX2Q8IUF8 465 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 MAML3Q96JK9 1138 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 NYAP2Q9P242 653 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
CCHCR1-229ENST00000512418 M0R2C6 588 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 APPP05067 770 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 COPB2P35606 906 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 ARRDC4Q8NCT1 418 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 PI4K2BQ8TCG2 481 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 MMP19Q99542 508 aa17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-229ENST00000512418 PATL2C9JE40 543 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 STAT3P40763 770 aa17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 TDHQ8IZJ6 230 aa17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 REPS2Q8NFH8 660 aa17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-229ENST00000512418 IGKV6D-41A0A0C4DH26 115 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 KBTBD13C9JR72 458 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 F5H6K3 240 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 NDUFB10O96000 172 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 KLRC3Q07444 240 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 KCTD2Q14681 263 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 ZNF444Q8N0Y2 327 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 FSD1Q9BTV5 496 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 DIS3Q9Y2L1 958 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-229ENST00000512418 PRDM1O75626 825 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 MX1P20591 662 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 GJC2Q5T442 439 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 ANO1Q5XXA6 986 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 GPR153Q6NV75 609 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 TEX13BQ9BXU2 312 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
CCHCR1-229ENST00000512418 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 PLXNA1Q9UIW2 1896 aa17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 PGK2P07205 417 aa17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 CEP95Q96GE4 821 aa17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-229ENST00000512418 TTLL1O95922 423 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 RTP1P59025 263 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 PDE4BQ07343 736 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 ZNF792Q3KQV3 632 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 MKL1Q969V6 931 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 TINF2Q9BSI4 451 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 NAPBQ9H115 298 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
CCHCR1-229ENST00000512418 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 TSPY3P0CV98 308 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 TSPY8P0CW00 308 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 RARBP10826 455 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 LRRC41Q15345 812 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
CCHCR1-229ENST00000512418 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms