RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 PCDHAC2Q9Y5I4 1007 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 FOXN1O15353 648 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 DTNBO60941 627 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 METAP2P50579 478 aaKnown RBP eCLIP16.05■□□□□ 0.16
NME1-209ENST00000511355 PPARAQ07869 468 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
NME1-209ENST00000511355 AOPEPQ8N6M6 819 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 WBP1LQ9NX94 342 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 MCM9Q9NXL9 1143 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 TLL2Q9Y6L7 1015 aa16.05■□□□□ 0.16
NME1-209ENST00000511355 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 COL2A1P02458 1487 aaPredicted RBP16.04■□□□□ 0.16
NME1-209ENST00000511355 USP17L12C9JPN9 530 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 USP17L21D6R901 530 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 WNT10BO00744 389 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 HAND2P61296 217 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 TRIM29Q14134 588 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 PAXIP1Q6ZW49 1069 aaPredicted RBP16.04■□□□□ 0.16
NME1-209ENST00000511355 MAPKAPK5Q8IW41 473 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 C16orf45Q96MC5 204 aaPredicted RBP16.04■□□□□ 0.16
NME1-209ENST00000511355 KRT23Q9C075 422 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 OGFRQ9NZT2 677 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 NEDD4P46934 1319 aa16.04■□□□□ 0.16
NME1-209ENST00000511355 A0A1B0GVL5 298 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 TRAF5O00463 557 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
NME1-209ENST00000511355 SYKP43405 635 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 FKBP1CQ5VVH2 108 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 CST9Q5W186 159 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 HHIPL1Q96JK4 782 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
NME1-209ENST00000511355 MYH1P12882 1939 aa16.03■□□□□ 0.16
NME1-209ENST00000511355 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 SHTN1A0MZ66 631 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
NME1-209ENST00000511355 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.16
NME1-209ENST00000511355 PICALMQ13492 652 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 KIF4BQ2VIQ3 1234 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 APOA5Q6Q788 366 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 TBC1D10CQ8IV04 446 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 TRPM4Q8TD43 1214 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 STAG1Q8WVM7 1258 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 CAPNS2Q96L46 248 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.16
NME1-209ENST00000511355 GLIS2Q9BZE0 524 aaPredicted RBP16.02■□□□□ 0.16
NME1-209ENST00000511355 FTOQ9C0B1 505 aaKnown RBP eCLIP16.02■□□□□ 0.165e-9■■□□□ 11.9
NME1-209ENST00000511355 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.16
NME1-209ENST00000511355 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
NME1-209ENST00000511355 ZBTB43O43298 467 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 ENTPD3O75355 529 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 PFKFB1P16118 471 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 IFNAR1P17181 557 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
NME1-209ENST00000511355 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 NFIAQ12857 509 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 PTPAQ15257 358 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 RESP18Q5W5W9 173 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 KANK3Q6NY19 840 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 CHST3Q7LGC8 479 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 NBPF11Q86T75 865 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 TRIML1Q8N9V2 468 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 CCDC34Q96HJ3 373 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 DACH1Q9UI36 760 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 MAP2K2P36507 400 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 NT5C2P49902 561 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
NME1-209ENST00000511355 NCAPHQ15003 741 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 NTRK3Q16288 839 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 KRT40Q6A162 431 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 SRRTQ9BXP5 876 aaKnown RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 DHX36Q9H2U1 1008 aaKnown RBP16.01■□□□□ 0.15
NME1-209ENST00000511355 L2HGDHQ9H9P8 463 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
NME1-209ENST00000511355 EGFRP00533 1210 aa16■□□□□ 0.15
NME1-209ENST00000511355 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
NME1-209ENST00000511355 CACNB3P54284 484 aa16■□□□□ 0.15
NME1-209ENST00000511355 MYL5Q02045 173 aa16■□□□□ 0.15
NME1-209ENST00000511355 CTDSPL2Q05D32 466 aa16■□□□□ 0.15
NME1-209ENST00000511355 SART3Q15020 963 aaKnown RBP16■□□□□ 0.15
NME1-209ENST00000511355 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
NME1-209ENST00000511355 NBPF9Q3BBW0 867 aa16■□□□□ 0.15
NME1-209ENST00000511355 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms