RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CLIP2Q9UDT6 1046 aa27.35■■□□□ 1.97
SNF8-209ENST00000510558 PLIN4Q96Q06 1357 aa27.35■■□□□ 1.97
SNF8-209ENST00000510558 HOXC6P09630 235 aa27.34■■□□□ 1.97
SNF8-209ENST00000510558 NUCB1Q02818 461 aa27.34■■□□□ 1.97
SNF8-209ENST00000510558 CEP95Q96GE4 821 aa27.34■■□□□ 1.97
SNF8-209ENST00000510558 FLRT1Q9NZU1 646 aa27.34■■□□□ 1.97
SNF8-209ENST00000510558 ADAMTS5Q9UNA0 930 aa27.34■■□□□ 1.97
SNF8-209ENST00000510558 TRIM6-TRIM34B2RNG4 842 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 F5H6K3 240 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 STRNO43815 780 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 KLRC3Q07444 240 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 TMEM132BQ14DG7 1078 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 VPS53Q5VIR6 699 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 TICAM2Q86XR7 235 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 NPLOC4Q8TAT6 608 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 FAM227BQ96M60 508 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 MTMR4Q9NYA4 1195 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 PPP1R9AQ9ULJ8 1098 aa27.33■■□□□ 1.97
SNF8-209ENST00000510558 ZNFX1Q9P2E3 1918 aaKnown RBP27.33■■□□□ 1.97
SNF8-209ENST00000510558 CEP290O15078 2479 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 FRMPD3Q5JV73 1810 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 A0A0D9SFI3 127 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 NDUFB10O96000 172 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 TSPY3P0CV98 308 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 TSPY8P0CW00 308 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 ADORA2AP29274 412 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 MFSD14CQ5VZR4 134 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 NCAPG2Q86XI2 1143 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 ANKLE1Q8NAG6 615 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 NEDD1Q8NHV4 660 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 NUP88Q99567 741 aaPredicted RBP27.32■■□□□ 1.96
SNF8-209ENST00000510558 MROH8Q9H579 483 aa27.32■■□□□ 1.96
SNF8-209ENST00000510558 H0YGN5 161 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
SNF8-209ENST00000510558 MCMDC2Q4G0Z9 681 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 FAM47AQ5JRC9 791 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 DPP9Q86TI2 863 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 PLEKHM2Q8IWE5 1019 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 DIS3LQ8TF46 1054 aaKnown RBP27.31■■□□□ 1.96
SNF8-209ENST00000510558 MKL1Q969V6 931 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 RILPL2Q969X0 211 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 PAWRQ96IZ0 340 aaKnown RBP27.31■■□□□ 1.96
SNF8-209ENST00000510558 OGDHLQ9ULD0 1010 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 ALPK3Q96L96 1907 aa27.31■■□□□ 1.96
SNF8-209ENST00000510558 VWA5AO00534 786 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 TTLL1O95922 423 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 TFAP4Q01664 338 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 NECAB2Q7Z6G3 386 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 OSBPL3Q9H4L5 887 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 SYNPO2Q9UMS6 1093 aa27.3■■□□□ 1.96
SNF8-209ENST00000510558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.3■■□□□ 1.96
SNF8-209ENST00000510558 SLC25A27O95847 323 aa27.29■■□□□ 1.96
SNF8-209ENST00000510558 CTDSPL2Q05D32 466 aa27.29■■□□□ 1.96
SNF8-209ENST00000510558 NMIQ13287 307 aaPredicted RBP27.29■■□□□ 1.96
SNF8-209ENST00000510558 ABRAQ8N0Z2 381 aa27.29■■□□□ 1.96
SNF8-209ENST00000510558 LRRC47Q8N1G4 583 aaKnown RBP27.29■■□□□ 1.96
SNF8-209ENST00000510558 SLF1Q9BQI6 1058 aa27.29■■□□□ 1.96
SNF8-209ENST00000510558 ALX1Q15699 326 aa27.28■■□□□ 1.96
SNF8-209ENST00000510558 RIOX2Q8IUF8 465 aa27.28■■□□□ 1.96
SNF8-209ENST00000510558 REPS2Q8NFH8 660 aa27.28■■□□□ 1.96
SNF8-209ENST00000510558 ANAPC4Q9UJX5 808 aa27.28■■□□□ 1.96
SNF8-209ENST00000510558 ZNF214Q9UL59 606 aaPredicted RBP27.28■■□□□ 1.96
SNF8-209ENST00000510558 COBLO75128 1261 aa27.27■■□□□ 1.96
SNF8-209ENST00000510558 SLC34A2O95436 690 aa27.27■■□□□ 1.96
SNF8-209ENST00000510558 CYP2C19P33261 490 aa27.27■■□□□ 1.96
SNF8-209ENST00000510558 MNX1P50219 401 aaPredicted RBP27.27■■□□□ 1.96
SNF8-209ENST00000510558 GMCL1P1Q8NEA9 526 aa27.27■■□□□ 1.96
SNF8-209ENST00000510558 INCENPQ9NQS7 918 aa27.27■■□□□ 1.96
SNF8-209ENST00000510558 PLXNA1Q9UIW2 1896 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 IGHA2P01877 340 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 FCER1AP12319 257 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 STAT3P40763 770 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 OLFML2BQ68BL8 750 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 LHX8Q68G74 356 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 ZNF589Q86UQ0 364 aaPredicted RBP27.26■■□□□ 1.95
SNF8-209ENST00000510558 NBPF3Q9H094 633 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 SLC5A4Q9NY91 659 aa27.26■■□□□ 1.95
SNF8-209ENST00000510558 CCDC171Q6TFL3 1326 aa27.25■■□□□ 1.95
SNF8-209ENST00000510558 TSPY2A6NKD2 308 aa27.25■■□□□ 1.95
SNF8-209ENST00000510558 PRPF38AQ8NAV1 312 aaKnown RBP27.25■■□□□ 1.95
SNF8-209ENST00000510558 NR2E3Q9Y5X4 410 aa27.25■■□□□ 1.95
SNF8-209ENST00000510558 TACC3Q9Y6A5 838 aa27.25■■□□□ 1.95
SNF8-209ENST00000510558 FGAP02671 866 aa27.24■■□□□ 1.95
SNF8-209ENST00000510558 HSPD1P10809 573 aaKnown RBP27.24■■□□□ 1.95
SNF8-209ENST00000510558 SDSP20132 328 aa27.24■■□□□ 1.95
SNF8-209ENST00000510558 COPB2P35606 906 aa27.24■■□□□ 1.95
SNF8-209ENST00000510558 SLFN13Q68D06 897 aa27.24■■□□□ 1.95
SNF8-209ENST00000510558 MMP19Q99542 508 aa27.24■■□□□ 1.95
SNF8-209ENST00000510558 ZMYM6O95789 1325 aa27.23■■□□□ 1.95
SNF8-209ENST00000510558 EVI5O60447 810 aa27.23■■□□□ 1.95
SNF8-209ENST00000510558 HABP4Q5JVS0 413 aaKnown RBP27.23■■□□□ 1.95
SNF8-209ENST00000510558 PPP4R3BQ5MIZ7 849 aa27.23■■□□□ 1.95
SNF8-209ENST00000510558 C11orf49Q9H6J7 331 aa27.23■■□□□ 1.95
SNF8-209ENST00000510558 FEM1BQ9UK73 627 aa27.23■■□□□ 1.95
SNF8-209ENST00000510558 ORC4O43929 436 aa27.22■■□□□ 1.95
SNF8-209ENST00000510558 CYBAP13498 195 aa27.22■■□□□ 1.95
SNF8-209ENST00000510558 CNGA1P29973 690 aa27.22■■□□□ 1.95
SNF8-209ENST00000510558 TRPV1Q8NER1 839 aa27.22■■□□□ 1.95
SNF8-209ENST00000510558 KIFC2Q96AC6 838 aa27.22■■□□□ 1.95
SNF8-209ENST00000510558 TEX13BQ9BXU2 312 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms