RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PMEPA1Q969W9 287 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 YTHDC1Q96MU7 727 aaKnown RBP6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 CHPF2Q9P2E5 772 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 NARFQ9UHQ1 456 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 PTPRCP08575 1304 aa6.96□□□□□ -1.3
HMGB1P44-201ENST00000508597 COL15A1P39059 1388 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 PDE2AO00408 941 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 IPO8O15397 1037 aaKnown RBP6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 PROCP04070 461 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 RARSP54136 660 aaKnown RBP6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 ZNF827Q17R98 1081 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 HSP90AB3PQ58FF7 597 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 KIF6Q6ZMV9 814 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 LRP10Q7Z4F1 713 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 FBXO33Q7Z6M2 555 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 NLGN1Q8N2Q7 840 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 PLBD2Q8NHP8 589 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 EPS8L3Q8TE67 593 aaKnown RBP6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 ARHGAP45Q92619 1136 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 KCNK4Q9NYG8 393 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 ZNF652Q9Y2D9 606 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 PNPLA7Q6ZV29 1317 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 KIF16BQ96L93 1317 aa6.95□□□□□ -1.3
HMGB1P44-201ENST00000508597 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 PIK3R2O00459 728 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 DDX3YO15523 660 aaKnown RBP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 SMNDC1O75940 238 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 MYL6BP14649 208 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 CDC27P30260 824 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 SPRED3Q2MJR0 410 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 COL23A1Q86Y22 540 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 CSRNP1Q96S65 589 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 TCF12Q99081 682 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 SMC4Q9NTJ3 1288 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 WWC3Q9ULE0 1092 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 MAP3K15Q6ZN16 1313 aa6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 USP42Q9H9J4 1324 aaKnown RBP6.94□□□□□ -1.3
HMGB1P44-201ENST00000508597 NUP98P52948 1817 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 DLL1O00548 723 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 CPNE3O75131 537 aaKnown RBP6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 EDN3P14138 238 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 GRIA4P48058 902 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 PROSER3Q2NL68 480 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 PARP10Q53GL7 1025 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 PRRT3Q5FWE3 981 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 KSR2Q6VAB6 950 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 VN1R5Q7Z5H4 357 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 XAGE3Q8WTP9 111 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 API5Q9BZZ5 524 aaKnown RBP6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 SOX13Q9UN79 622 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 IBTKQ9P2D0 1353 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 C4AP0C0L4 1744 aa6.93□□□□□ -1.3
HMGB1P44-201ENST00000508597 BCORQ6W2J9 1755 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 CAMTA2O94983 1202 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 GYS1P13807 737 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 ELNP15502 786 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 PLCB3Q01970 1234 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 R3HDM1Q15032 1099 aaKnown RBP6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 KLHDC7BQ96G42 594 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 MTFR1LQ9H019 292 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 PHAXQ9H814 394 aaKnown RBP6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 COL24A1Q17RW2 1714 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 ATP10DQ9P241 1426 aa6.92□□□□□ -1.3
HMGB1P44-201ENST00000508597 SCN7AQ01118 1682 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 CASZ1Q86V15 1759 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 PI4KAP2A4QPH2 592 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 SPDYE3A6NKU9 549 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ALX3O95076 343 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ANXA1P04083 346 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 TM4SF1P30408 202 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 PIP4K2AP48426 406 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 RAC1P63000 192 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 EAPPQ56P03 285 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 KIAA0319Q5VV43 1072 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 TTLL7Q6ZT98 887 aa6.91□□□□□ -1.3
HMGB1P44-201ENST00000508597 PPP1R42Q7Z4L9 355 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms