RNA–Protein interactions for RNA: ENST00000508100.1

ITGA3-211, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-211ENST00000508100 LRRCC1Q9C099 1032 aa19.66■□□□□ 0.74
ITGA3-211ENST00000508100 RLFQ13129 1914 aa19.66■□□□□ 0.74
ITGA3-211ENST00000508100 TMEM132BQ14DG7 1078 aa19.65■□□□□ 0.74
ITGA3-211ENST00000508100 PRAMEF19Q5SWL8 479 aa19.65■□□□□ 0.74
ITGA3-211ENST00000508100 SLC39A5Q6ZMH5 540 aa19.65■□□□□ 0.74
ITGA3-211ENST00000508100 MAML3Q96JK9 1138 aa19.65■□□□□ 0.74
ITGA3-211ENST00000508100 MMP19Q99542 508 aa19.65■□□□□ 0.74
ITGA3-211ENST00000508100 SMIM22K7EJ46 135 aa19.64■□□□□ 0.73
ITGA3-211ENST00000508100 KCTD2Q14681 263 aa19.64■□□□□ 0.73
ITGA3-211ENST00000508100 CTR9Q6PD62 1173 aa19.64■□□□□ 0.73
ITGA3-211ENST00000508100 PRDM5Q9NQX1 630 aaPredicted RBP19.64■□□□□ 0.73
ITGA3-211ENST00000508100 A0A0G2JMZ2 1700 aa19.64■□□□□ 0.73
ITGA3-211ENST00000508100 CHGBP05060 677 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 STAT3P40763 770 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 ADCYAP1R1P41586 468 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 RIOX2Q8IUF8 465 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 PUS7LQ9H0K6 701 aaKnown RBP19.63■□□□□ 0.73
ITGA3-211ENST00000508100 FBXO28Q9NVF7 368 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 ARPP21Q9UBL0 812 aaPredicted RBP19.63■□□□□ 0.73
ITGA3-211ENST00000508100 NRBP1Q9UHY1 535 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 ADAMTS5Q9UNA0 930 aa19.63■□□□□ 0.73
ITGA3-211ENST00000508100 RARBP10826 455 aa19.62■□□□□ 0.73
ITGA3-211ENST00000508100 COPB2P35606 906 aa19.62■□□□□ 0.73
ITGA3-211ENST00000508100 LRRC41Q15345 812 aa19.62■□□□□ 0.73
ITGA3-211ENST00000508100 PPP1R9AQ9ULJ8 1098 aa19.62■□□□□ 0.73
ITGA3-211ENST00000508100 VWA5AO00534 786 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
ITGA3-211ENST00000508100 PGK2P07205 417 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 TRIM60Q495X7 471 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 FAM109BQ6ICB4 259 aaPredicted RBP19.61■□□□□ 0.73
ITGA3-211ENST00000508100 FERMT2Q96AC1 680 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 MKNK2Q9HBH9 465 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 XPNPEP3Q9NQH7 507 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 DIS3Q9Y2L1 958 aaKnown RBP19.61■□□□□ 0.73
ITGA3-211ENST00000508100 MYH7P12883 1935 aa19.61■□□□□ 0.73
ITGA3-211ENST00000508100 ZNFX1Q9P2E3 1918 aaKnown RBP19.61■□□□□ 0.73
ITGA3-211ENST00000508100 GPATCH3Q96I76 525 aa19.6■□□□□ 0.73
ITGA3-211ENST00000508100 STRBPQ96SI9 672 aaKnown RBP19.6■□□□□ 0.73
ITGA3-211ENST00000508100 TINF2Q9BSI4 451 aa19.6■□□□□ 0.73
ITGA3-211ENST00000508100 MINDY4BA8MYZ0 360 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 POTEB2H3BUK9 544 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 SNX17Q15036 470 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 RNF180Q86T96 592 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 STK11IPQ8N1F8 1099 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 CNPY2Q9Y2B0 182 aa19.59■□□□□ 0.73
ITGA3-211ENST00000508100 COL6A3P12111 3177 aa19.58■□□□□ 0.73
ITGA3-211ENST00000508100 COL11A1P12107 1806 aaPredicted RBP19.58■□□□□ 0.73
ITGA3-211ENST00000508100 PARP14Q460N5 1801 aa19.58■□□□□ 0.73
ITGA3-211ENST00000508100 SMCHD1A6NHR9 2005 aa19.58■□□□□ 0.73
ITGA3-211ENST00000508100 ZNF792Q3KQV3 632 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 SBK1Q52WX2 424 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 C1orf53Q5VUE5 145 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 GIMAP6Q6P9H5 292 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 BADQ92934 168 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.58■□□□□ 0.72
ITGA3-211ENST00000508100 ZNF214Q9UL59 606 aaPredicted RBP19.58■□□□□ 0.72
ITGA3-211ENST00000508100 PHF24Q9UPV7 400 aa19.58■□□□□ 0.72
ITGA3-211ENST00000508100 CTDP1Q9Y5B0 961 aaPredicted RBP19.58■□□□□ 0.72
ITGA3-211ENST00000508100 DNAH12Q6ZR08 3092 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 PGK1P00558 417 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 RASA1P20936 1047 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 TLE2Q04725 743 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 SHHQ15465 462 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 ZNF697Q5TEC3 545 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 TEX13BQ9BXU2 312 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 ZNF287Q9HBT7 754 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 PDLIM7Q9NR12 457 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 NYAP2Q9P242 653 aa19.57■□□□□ 0.72
ITGA3-211ENST00000508100 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 F5H6K3 240 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 AKR1A1P14550 325 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 TAL1P17542 331 aaPredicted RBP19.56■□□□□ 0.72
ITGA3-211ENST00000508100 SLC4A3P48751 1232 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 KLRC3Q07444 240 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 SNRNP48Q6IEG0 339 aaKnown RBP19.56■□□□□ 0.72
ITGA3-211ENST00000508100 REPS2Q8NFH8 660 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 APPBP2Q92624 585 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 NUP88Q99567 741 aaPredicted RBP19.56■□□□□ 0.72
ITGA3-211ENST00000508100 TACC3Q9Y6A5 838 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 CUL9Q8IWT3 2517 aa19.56■□□□□ 0.72
ITGA3-211ENST00000508100 RNF113AO15541 343 aaKnown RBP19.55■□□□□ 0.72
ITGA3-211ENST00000508100 ZBED4O75132 1171 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 APPP05067 770 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 ZFYP08048 801 aaPredicted RBP19.55■□□□□ 0.72
ITGA3-211ENST00000508100 GNAT2P19087 354 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 TDO2P48775 406 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 SH3RF1Q7Z6J0 888 aa19.55■□□□□ 0.72
ITGA3-211ENST00000508100 ZNF444Q8N0Y2 327 aaPredicted RBP19.55■□□□□ 0.72
ITGA3-211ENST00000508100 MSL3Q8N5Y2 521 aaKnown RBP19.55■□□□□ 0.72
ITGA3-211ENST00000508100 PRPF38AQ8NAV1 312 aaKnown RBP19.55■□□□□ 0.72
ITGA3-211ENST00000508100 OSBP2Q969R2 916 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms