RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 FBXL21Q9UKT6 434 aa11.07□□□□□ -0.64
RETREG1-203ENST00000506441 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
RETREG1-203ENST00000506441 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 MFSD4AQ8N468 514 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 MRFAP1L1Q96HT8 127 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 LNPKQ9C0E8 428 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 GBP3Q9H0R5 595 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 ZSWIM4Q9H7M6 989 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 PCDHB12Q9Y5F1 795 aa11.06□□□□□ -0.64
RETREG1-203ENST00000506441 IGSF3O75054 1194 aa11.05□□□□□ -0.64
RETREG1-203ENST00000506441 TP53P04637 393 aaPredicted RBP11.05□□□□□ -0.64
RETREG1-203ENST00000506441 FURINP09958 794 aa11.05□□□□□ -0.64
RETREG1-203ENST00000506441 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
RETREG1-203ENST00000506441 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
RETREG1-203ENST00000506441 C6orf15Q6UXA7 325 aaPredicted RBP11.05□□□□□ -0.64
RETREG1-203ENST00000506441 APBA2Q99767 749 aa11.05□□□□□ -0.64
RETREG1-203ENST00000506441 EPN3Q9H201 632 aa11.05□□□□□ -0.64
RETREG1-203ENST00000506441 TRIT1Q9H3H1 467 aaKnown RBP11.05□□□□□ -0.64
RETREG1-203ENST00000506441 K7ELQ4 463 aaPredicted RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 AGRPO00253 132 aa11.04□□□□□ -0.64
RETREG1-203ENST00000506441 ZNF865P0CJ78 1059 aaPredicted RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 IFRD2Q12894 506 aaPredicted RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 AUHQ13825 339 aaKnown RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
RETREG1-203ENST00000506441 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 FAM214BQ7L5A3 538 aa11.04□□□□□ -0.64
RETREG1-203ENST00000506441 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
RETREG1-203ENST00000506441 HEXIM2Q96MH2 286 aaKnown RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 SRPK1Q96SB4 655 aaKnown RBP11.04□□□□□ -0.64
RETREG1-203ENST00000506441 NUP160Q12769 1436 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 ANKRD34BA5PLL1 514 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 PPM1BO75688 479 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 CCDC144BQ3MJ40 725 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 ADAT2Q7Z6V5 191 aaKnown RBP11.03□□□□□ -0.64
RETREG1-203ENST00000506441 ZDHHC13Q8IUH4 622 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
RETREG1-203ENST00000506441 VWCEQ96DN2 955 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 GPATCH2Q9NW75 528 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 PRR13Q9NZ81 148 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 PCDHB10Q9UN67 800 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 KIAA0586Q9BVV6 1533 aa11.03□□□□□ -0.64
RETREG1-203ENST00000506441 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 GJB6O95452 261 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 FOSL1P15407 271 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 NETO1Q8TDF5 533 aa11.02□□□□□ -0.65
RETREG1-203ENST00000506441 ZNF512BQ96KM6 892 aaPredicted RBP11.02□□□□□ -0.65
RETREG1-203ENST00000506441 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 PDPK1O15530 556 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 ITGA4P13612 1032 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 CLCN7P51798 805 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 SERINC3Q13530 473 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 PRSS36Q5K4E3 855 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 TDRD10Q5VZ19 366 aaKnown RBP11.01□□□□□ -0.65
RETREG1-203ENST00000506441 NOP9Q86U38 636 aaKnown RBP11.01□□□□□ -0.65
RETREG1-203ENST00000506441 CRACR2BQ8N4Y2 399 aaPredicted RBP11.01□□□□□ -0.65
RETREG1-203ENST00000506441 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
RETREG1-203ENST00000506441 CWC22Q9HCG8 908 aaKnown RBP11.01□□□□□ -0.65
RETREG1-203ENST00000506441 A0A087WZG4 1122 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 CCDC85CA6NKD9 419 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 CEACAM5P06731 702 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 OXCT1P55809 520 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 IFI16Q16666 785 aaKnown RBP11□□□□□ -0.65
RETREG1-203ENST00000506441 DTWD2Q8NBA8 298 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 ST13P5Q8NFI4 369 aaPredicted RBP11□□□□□ -0.65
RETREG1-203ENST00000506441 DEPDC7Q96QD5 511 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 HAUS7Q99871 368 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 FAM86C1Q9NVL1 165 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 CAPN6Q9Y6Q1 641 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 GOLGA3Q08378 1498 aa11□□□□□ -0.65
RETREG1-203ENST00000506441 ARHGEF11O15085 1522 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 C9IYK1 514 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 ITIH2P19823 946 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 CD247P20963 164 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 RASGRF1Q13972 1273 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
RETREG1-203ENST00000506441 SHISA5Q8N114 240 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 ZNF669Q96BR6 464 aaPredicted RBP10.99□□□□□ -0.65
RETREG1-203ENST00000506441 WHRNQ9P202 907 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 CDK11AQ9UQ88 783 aaPredicted RBP10.99□□□□□ -0.65
RETREG1-203ENST00000506441 SUGT1Q9Y2Z0 365 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 IQGAP2Q13576 1575 aa10.99□□□□□ -0.65
RETREG1-203ENST00000506441 NOP56O00567 594 aaKnown RBP10.98□□□□□ -0.65
RETREG1-203ENST00000506441 COBLO75128 1261 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 BMS1Q14692 1282 aaKnown RBP10.98□□□□□ -0.65
RETREG1-203ENST00000506441 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 KLHL6Q8WZ60 621 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 MISP3Q96FF7 219 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
RETREG1-203ENST00000506441 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
RETREG1-203ENST00000506441 TNK2Q07912 1038 aa10.97□□□□□ -0.65
RETREG1-203ENST00000506441 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
RETREG1-203ENST00000506441 SV2CQ496J9 727 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms