RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RGS2P41220 211 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 KLRC3Q07444 240 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 CCL14Q16627 93 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 LBX2Q6XYB7 198 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 MOV10L1Q9BXT6 1211 aaKnown RBP16.91■□□□□ 0.3
HOXC9-202ENST00000504557 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 TTLL1O95922 423 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
HOXC9-202ENST00000504557 TTC22Q5TAA0 569 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 SHISA4Q96DD7 197 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 DEFB118Q96PH6 123 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 SPATC1LQ9H0A9 340 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
HOXC9-202ENST00000504557 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.29
HOXC9-202ENST00000504557 GJB1P08034 283 aa16.89■□□□□ 0.29
HOXC9-202ENST00000504557 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
HOXC9-202ENST00000504557 ERCC3P19447 782 aa16.89■□□□□ 0.29
HOXC9-202ENST00000504557 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.29
HOXC9-202ENST00000504557 MAP2K5Q13163 448 aa16.89■□□□□ 0.29
HOXC9-202ENST00000504557 MORN1Q5T089 497 aa16.89■□□□□ 0.29
HOXC9-202ENST00000504557 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
HOXC9-202ENST00000504557 APBA2Q99767 749 aa16.89■□□□□ 0.29
HOXC9-202ENST00000504557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.291e-7■■■■□ 24.6
HOXC9-202ENST00000504557 HIP1O00291 1037 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
HOXC9-202ENST00000504557 PTPREP23469 700 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 IKQ13123 557 aaPredicted RBP16.88■□□□□ 0.29
HOXC9-202ENST00000504557 TMEM132BQ14DG7 1078 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 ALX1Q15699 326 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 SLFN13Q68D06 897 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 MB21D1Q8N884 522 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 NKX2-3Q8TAU0 364 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 KIFC2Q96AC6 838 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.88■□□□□ 0.29
HOXC9-202ENST00000504557 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 CTDP1Q9Y5B0 961 aaPredicted RBP16.88■□□□□ 0.29
HOXC9-202ENST00000504557 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
HOXC9-202ENST00000504557 SLC15A5A6NIM6 579 aa16.87■□□□□ 0.29
HOXC9-202ENST00000504557 GJA8P48165 433 aa16.87■□□□□ 0.29
HOXC9-202ENST00000504557 DPP9Q86TI2 863 aa16.87■□□□□ 0.29
HOXC9-202ENST00000504557 CPXCR1Q8N123 301 aa16.87■□□□□ 0.29
HOXC9-202ENST00000504557 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
HOXC9-202ENST00000504557 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
HOXC9-202ENST00000504557 FRMPD3Q5JV73 1810 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 VWA5AO00534 786 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 SGPL1O95470 568 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 ADORA2AP29274 412 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 MFSD6Q6ZSS7 791 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 RASGRP2Q7LDG7 609 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 NPLOC4Q8TAT6 608 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 USP6NLQ92738 828 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 FLRT1Q9NZU1 646 aa16.86■□□□□ 0.29
HOXC9-202ENST00000504557 MKI67P46013 3256 aaKnown RBP16.86■□□□□ 0.29
HOXC9-202ENST00000504557 ZNF213O14771 459 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 ORC4O43929 436 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
HOXC9-202ENST00000504557 XRCC5P13010 732 aaKnown RBP16.85■□□□□ 0.29
HOXC9-202ENST00000504557 MCCP23508 829 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 CACNB2Q08289 660 aaPredicted RBP16.85■□□□□ 0.29
HOXC9-202ENST00000504557 GRB14Q14449 540 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 MKL1Q969V6 931 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 NBPF3Q9H094 633 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 IL25Q9H293 177 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 RPTORQ8N122 1335 aa16.85■□□□□ 0.29
HOXC9-202ENST00000504557 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 BMP3P12645 472 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 CNGA1P29973 690 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
HOXC9-202ENST00000504557 STAT3P40763 770 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 SLC1A4P43007 532 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
HOXC9-202ENST00000504557 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
HOXC9-202ENST00000504557 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 MMP19Q99542 508 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 MROH8Q9H579 483 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 PAK6Q9NQU5 681 aaPredicted RBP16.84■□□□□ 0.29
HOXC9-202ENST00000504557 NEDD4P46934 1319 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
HOXC9-202ENST00000504557 MCM3APO60318 1980 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 ZBED4O75132 1171 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 PGK2P07205 417 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 FCER1AP12319 257 aa16.83■□□□□ 0.28
HOXC9-202ENST00000504557 CYP2C19P33261 490 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms