RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 ATG4CQ96DT6 458 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 TANGO6Q9C0B7 1094 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 MROH8Q9H579 483 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 STXBP5LQ9Y2K9 1186 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
PROM1-204ENST00000503884 CYP2D7A0A087X1C5 515 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 USP17L21D6R901 530 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 APBB1O00213 710 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 WDR46O15213 610 aaKnown RBP10.84□□□□□ -0.67
PROM1-204ENST00000503884 CNGA1P29973 690 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
PROM1-204ENST00000503884 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 FAM109BQ6ICB4 259 aaPredicted RBP10.84□□□□□ -0.67
PROM1-204ENST00000503884 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 MAML3Q96JK9 1138 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
PROM1-204ENST00000503884 ARHGEF10LQ9HCE6 1279 aa10.84□□□□□ -0.67
PROM1-204ENST00000503884 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
PROM1-204ENST00000503884 FLOT1O75955 427 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 EEF2P13639 858 aaKnown RBP10.83□□□□□ -0.68
PROM1-204ENST00000503884 RTP1P59025 263 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
PROM1-204ENST00000503884 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 ARRDC4Q8NCT1 418 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
PROM1-204ENST00000503884 PUS7LQ9H0K6 701 aaKnown RBP10.83□□□□□ -0.68
PROM1-204ENST00000503884 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
PROM1-204ENST00000503884 SH2D4AQ9H788 454 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 NRBP1Q9UHY1 535 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
PROM1-204ENST00000503884 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 DLL1O00548 723 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 SLC25A27O95847 323 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
PROM1-204ENST00000503884 LRRC41Q15345 812 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 ZNF792Q3KQV3 632 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 SLC39A5Q6ZMH5 540 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 NCAPG2Q86XI2 1143 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 RIOX2Q8IUF8 465 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
PROM1-204ENST00000503884 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 ZNF214Q9UL59 606 aaPredicted RBP10.82□□□□□ -0.68
PROM1-204ENST00000503884 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 DIS3Q9Y2L1 958 aaKnown RBP10.82□□□□□ -0.68
PROM1-204ENST00000503884 SLC4A4Q9Y6R1 1079 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
PROM1-204ENST00000503884 VWA5AO00534 786 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 FCER1AP12319 257 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 PLS1Q14651 629 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 SBK1Q52WX2 424 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 ANO1Q5XXA6 986 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
PROM1-204ENST00000503884 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
PROM1-204ENST00000503884 MCM3APO60318 1980 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 GSG1L2A8MUP6 293 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 KBTBD13C9JR72 458 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
PROM1-204ENST00000503884 RASA1P20936 1047 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 STAT3P40763 770 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 TRIM60Q495X7 471 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 GIMAP6Q6P9H5 292 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 GUCD1Q96NT3 240 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 LBHD1Q9BQE6 289 aaPredicted RBP10.8□□□□□ -0.68
PROM1-204ENST00000503884 TINF2Q9BSI4 451 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 PDLIM7Q9NR12 457 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 ARPP21Q9UBL0 812 aaPredicted RBP10.8□□□□□ -0.68
PROM1-204ENST00000503884 ATP11BQ9Y2G3 1177 aa10.8□□□□□ -0.68
PROM1-204ENST00000503884 IGKV6D-41A0A0C4DH26 115 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 SMARCA5O60264 1052 aaPredicted RBP10.79□□□□□ -0.68
PROM1-204ENST00000503884 PGK2P07205 417 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 TAL1P17542 331 aaPredicted RBP10.79□□□□□ -0.68
PROM1-204ENST00000503884 ADCYAP1R1P41586 468 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 SHHQ15465 462 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
PROM1-204ENST00000503884 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 AMOTL1Q8IY63 956 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 KBTBD3Q8NAB2 608 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
PROM1-204ENST00000503884 MMP19Q99542 508 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
PROM1-204ENST00000503884 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
PROM1-204ENST00000503884 DNAJC25-GNG10A0A024R161 153 aa10.78□□□□□ -0.68
PROM1-204ENST00000503884 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms