RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 ARRDC4Q8NCT1 418 aa21.11■□□□□ 0.97
SMIM19-206ENST00000498447 LRRCC1Q9C099 1032 aa21.11■□□□□ 0.97
SMIM19-206ENST00000498447 PUS7LQ9H0K6 701 aaKnown RBP21.11■□□□□ 0.97
SMIM19-206ENST00000498447 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
SMIM19-206ENST00000498447 COL11A1P12107 1806 aaPredicted RBP21.11■□□□□ 0.97
SMIM19-206ENST00000498447 CTR9Q6PD62 1173 aa21.1■□□□□ 0.97
SMIM19-206ENST00000498447 MAML3Q96JK9 1138 aa21.1■□□□□ 0.97
SMIM19-206ENST00000498447 LBHD1Q9BQE6 289 aaPredicted RBP21.1■□□□□ 0.97
SMIM19-206ENST00000498447 KANSL2Q9H9L4 492 aa21.1■□□□□ 0.97
SMIM19-206ENST00000498447 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
SMIM19-206ENST00000498447 KBTBD13C9JR72 458 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 SMARCA5O60264 1052 aaPredicted RBP21.09■□□□□ 0.97
SMIM19-206ENST00000498447 SLC25A27O95847 323 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 FCER1AP12319 257 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 PRAMEF19Q5SWL8 479 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 FBXO28Q9NVF7 368 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 MTMR10Q9NXD2 777 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 ADAMTS5Q9UNA0 930 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 ATP11BQ9Y2G3 1177 aa21.09■□□□□ 0.97
SMIM19-206ENST00000498447 ZNFX1Q9P2E3 1918 aaKnown RBP21.08■□□□□ 0.97
SMIM19-206ENST00000498447 GOPCQ9HD26 462 aa21.08■□□□□ 0.97
SMIM19-206ENST00000498447 ARPP21Q9UBL0 812 aaPredicted RBP21.08■□□□□ 0.97
SMIM19-206ENST00000498447 PRKAG2Q9UGJ0 569 aa21.08■□□□□ 0.97
SMIM19-206ENST00000498447 LTBP2Q14767 1821 aa21.08■□□□□ 0.96
SMIM19-206ENST00000498447 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
SMIM19-206ENST00000498447 C20orf194Q5TEA3 1177 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 SLC39A5Q6ZMH5 540 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 RIOX2Q8IUF8 465 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 MMP19Q99542 508 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 PPP1R9AQ9ULJ8 1098 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 STXBP5LQ9Y2K9 1186 aa21.07■□□□□ 0.96
SMIM19-206ENST00000498447 GREB1LQ9C091 1923 aaPredicted RBP21.07■□□□□ 0.96
SMIM19-206ENST00000498447 VWA5AO00534 786 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 RAD21O60216 631 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 FAM47AQ5JRC9 791 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 FAM83BQ5T0W9 1011 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 PPP4R3CPQ6ZMV5 832 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 STRBPQ96SI9 672 aaKnown RBP21.06■□□□□ 0.96
SMIM19-206ENST00000498447 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMIM19-206ENST00000498447 ECHDC1Q9NTX5 307 aa21.06■□□□□ 0.96
SMIM19-206ENST00000498447 DLL1O00548 723 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 PGK2P07205 417 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 STAT3P40763 770 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 SNX17Q15036 470 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 LRRC41Q15345 812 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 ZNF214Q9UL59 606 aaPredicted RBP21.05■□□□□ 0.96
SMIM19-206ENST00000498447 PLXNA1Q9UIW2 1896 aa21.05■□□□□ 0.96
SMIM19-206ENST00000498447 ADCYAP1R1P41586 468 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 KCTD2Q14681 263 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 TRIM60Q495X7 471 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 SBK1Q52WX2 424 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 REPS2Q8NFH8 660 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 NRBP1Q9UHY1 535 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 SMCHD1A6NHR9 2005 aa21.04■□□□□ 0.96
SMIM19-206ENST00000498447 ROBO3Q96MS0 1386 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 GSG1L2A8MUP6 293 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 RASA1P20936 1047 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 COPB2P35606 906 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 ZNF792Q3KQV3 632 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 KBTBD3Q8NAB2 608 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 FERMT2Q96AC1 680 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 TINF2Q9BSI4 451 aa21.03■□□□□ 0.96
SMIM19-206ENST00000498447 PRDM5Q9NQX1 630 aaPredicted RBP21.03■□□□□ 0.96
SMIM19-206ENST00000498447 DIS3Q9Y2L1 958 aaKnown RBP21.03■□□□□ 0.96
SMIM19-206ENST00000498447 RARBP10826 455 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 GIMAP6Q6P9H5 292 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 STK11IPQ8N1F8 1099 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 OSBP2Q969R2 916 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.96
SMIM19-206ENST00000498447 MKNK2Q9HBH9 465 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 XPNPEP3Q9NQH7 507 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 PDLIM7Q9NR12 457 aa21.02■□□□□ 0.96
SMIM19-206ENST00000498447 MINDY4BA8MYZ0 360 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 POTEB2H3BUK9 544 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 C1orf53Q5VUE5 145 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 FAM109BQ6ICB4 259 aaPredicted RBP21.01■□□□□ 0.95
SMIM19-206ENST00000498447 APPBP2Q92624 585 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 SLF1Q9BQI6 1058 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 NYAP2Q9P242 653 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 PHF24Q9UPV7 400 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 UNC80Q8N2C7 3258 aa21.01■□□□□ 0.95
SMIM19-206ENST00000498447 TAL1P17542 331 aaPredicted RBP21■□□□□ 0.95
SMIM19-206ENST00000498447 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
SMIM19-206ENST00000498447 GPATCH3Q96I76 525 aa21■□□□□ 0.95
SMIM19-206ENST00000498447 TEX13BQ9BXU2 312 aa21■□□□□ 0.95
SMIM19-206ENST00000498447 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
SMIM19-206ENST00000498447 F5H6K3 240 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 RNF113AO15541 343 aaKnown RBP20.99■□□□□ 0.95
SMIM19-206ENST00000498447 GPAA1O43292 621 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 NDUFB10O96000 172 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 PGK1P00558 417 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 ZNF865P0CJ78 1059 aaPredicted RBP20.99■□□□□ 0.95
SMIM19-206ENST00000498447 KLRC3Q07444 240 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 SH3RF1Q7Z6J0 888 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 RNF180Q86T96 592 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 BADQ92934 168 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 DCTPP1Q9H773 170 aa20.99■□□□□ 0.95
SMIM19-206ENST00000498447 TRIM43BA6NCK2 446 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 ZFYP08048 801 aaPredicted RBP20.98■□□□□ 0.95
SMIM19-206ENST00000498447 AKR1A1P14550 325 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms