RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PRMT3O60678 531 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 ZNF124Q15973 351 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 ZAR1Q86SH2 424 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 AMIGO3Q86WK7 504 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 ELP3Q9H9T3 547 aa6.8□□□□□ -1.32
HMGXB4-208ENST00000498325 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 DBX1A6NMT0 343 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 PDE2AO00408 941 aaPredicted RBP6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 PAPLNO95428 1278 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 CT47B1P0C2W7 299 aaPredicted RBP6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 DRD2P14416 443 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 RFX1P22670 979 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 ADMP35318 185 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 RRP1P56182 461 aaKnown RBP6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 ARHGEF25Q86VW2 580 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 CLUAP1Q96AJ1 413 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 PHACTR3Q96KR7 559 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 TMEM63CQ9P1W3 806 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 SOX13Q9UN79 622 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 SLIT3O75094 1523 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 ABCC6O95255 1503 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 COL18A1P39060 1754 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 CNTNAP1P78357 1384 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 PLEKHG2Q9H7P9 1386 aa6.79□□□□□ -1.32
HMGXB4-208ENST00000498325 LTN1O94822 1766 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 NFAT5O94916 1531 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 FAM170BA6NMN3 283 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 NFKBIEO00221 500 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 ACPPP15309 386 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 GNAI1P63096 354 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 SWI5Q1ZZU3 235 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 PDE12Q6L8Q7 609 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 LTV1Q96GA3 475 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 DZANK1Q9NVP4 752 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 PPP4R2Q9NY27 417 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 RNF181Q9P0P0 153 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 PRKAG2Q9UGJ0 569 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 CCNL1Q9UK58 526 aaPredicted RBP6.78□□□□□ -1.32
HMGXB4-208ENST00000498325 LOC100289279A0A1B0GTE1 492 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 BIN1O00499 593 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 HTATSF1O43719 755 aaKnown RBP6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 IRX6P78412 446 aaPredicted RBP6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 IKBKEQ14164 716 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 OCLNQ16625 522 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 ZNF438Q7Z4V0 828 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 AEBP1Q8IUX7 1158 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 MKNK1Q9BUB5 465 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 LRRC4CQ9HCJ2 640 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 CNTN3Q9P232 1028 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 KDRP35968 1356 aa6.77□□□□□ -1.33
HMGXB4-208ENST00000498325 KIAA1551Q9HCM1 1747 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 SOX1O00570 391 aaPredicted RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 TRPA1O75762 1119 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 CES1P23141 567 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 C2CD4AQ8NCU7 369 aaPredicted RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 STIM2Q9P246 746 aa6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 LAS1LQ9Y4W2 734 aaKnown RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
HMGXB4-208ENST00000498325 TNRC6CQ9HCJ0 1690 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 ZBTB39O15060 712 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 FARP2O94887 1054 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 DLGAP3O95886 979 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 VEGFAP15692 232 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 DPEP1P16444 411 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 CANXP27824 592 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 PLCL1Q15111 1095 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 PKN1Q16512 942 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 MTHFSDQ2M296 383 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 AMOTQ4VCS5 1084 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 PLEKHO1Q53GL0 409 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 EZH1Q92800 747 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 HHIPQ96QV1 700 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 PKD1L3Q7Z443 1732 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
HMGXB4-208ENST00000498325 DLG5Q8TDM6 1919 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 ZNF853P0CG23 659 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 KCNA3P22001 575 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 RARSP54136 660 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 TGFB2P61812 414 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 CYP27A1Q02318 531 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms