RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 WASF1Q92558 559 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 WDR24Q96S15 920 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.75
TM9SF4-207ENST00000495749 FAM237AA0A1B0GTK4 181 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 MMP10P09238 476 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 HEATR3Q7Z4Q2 680 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 COL23A1Q86Y22 540 aaPredicted RBP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 BAG3O95817 575 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 RBM5P52756 815 aaKnown RBP eCLIP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 RCSD1Q6JBY9 416 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 RBM17Q96I25 401 aaKnown RBP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 ATP8A2Q9NTI2 1148 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 MAPK8IP1Q9UQF2 711 aa10.33□□□□□ -0.76
TM9SF4-207ENST00000495749 BAZ2AQ9UIF9 1905 aaKnown RBP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 POSTNQ15063 836 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 C12orf60Q5U649 245 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 TOGARAM2Q6ZUX3 1019 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 EEF2KMTQ96G04 330 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 DESI2Q9BSY9 194 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 ZC3H12CQ9C0D7 883 aaKnown RBP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 BLZF1Q9H2G9 400 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 LEMD3Q9Y2U8 911 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 TRIM75PA6NK02 468 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 EFCAB8A8MWE9 144 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 ZRANB2O95218 330 aaKnown RBP eCLIP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 CASQ1P31415 396 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 KRT2P35908 639 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 FUT2Q10981 343 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 FRMPD2Q68DX3 1309 aaPredicted RBP10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 TMTC3Q6ZXV5 915 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 ANAPC4Q9UJX5 808 aa10.32□□□□□ -0.76
TM9SF4-207ENST00000495749 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 A0A087X0B3 334 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 POLRMTO00411 1230 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 XBP1P17861 261 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 PTGDRQ13258 359 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SHROOM1Q2M3G4 852 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 TEX35Q5T0J7 233 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 LRRC47Q8N1G4 583 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 TC2NQ8N9U0 490 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SAMSN1Q9NSI8 373 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 HOOK1Q9UJC3 728 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 THSD7AQ9UPZ6 1657 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 MPHOSPH10O00566 681 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SEMA3EO15041 775 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 ZBTB22O15209 634 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 CHRNA5P30532 468 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 KARSQ15046 597 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SPECC1LQ69YQ0 1117 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 FCHSD1Q86WN1 690 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 RASSF8Q8NHQ8 419 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 RNF26Q9BY78 433 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 PDGFDQ9GZP0 370 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 TTF2Q9UNY4 1162 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 DDX60Q8IY21 1712 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 MYH7P12883 1935 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 PP2D1A8MPX8 630 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 TBX2Q13207 712 aaPredicted RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 RILPL1Q5EBL4 403 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 EYA3Q99504 573 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 TMEM47Q9BQJ4 181 aa10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
TM9SF4-207ENST00000495749 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 MYH2Q9UKX2 1941 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 PPEF1O14829 653 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 MYO1BO43795 1136 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 STX10O60499 249 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 CDK8P49336 464 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 MTF1Q14872 753 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 SLC35G1Q2M3R5 365 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 ZSWIM4Q9H7M6 989 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 GPCPD1Q9NPB8 672 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 SCG2P13521 617 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 ZNF18P17022 549 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 PTPREP23469 700 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms