RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
RFTN1-211ENST00000495666 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 HOXC10Q9NYD6 342 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 CTDP1Q9Y5B0 961 aaPredicted RBP12.8□□□□□ -0.36
RFTN1-211ENST00000495666 PFASO15067 1338 aa12.8□□□□□ -0.36
RFTN1-211ENST00000495666 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 RASA1P20936 1047 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 TMEM132BQ14DG7 1078 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 GJC2Q5T442 439 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 LPAR1Q92633 364 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 MMP19Q99542 508 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 NAPBQ9H115 298 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
RFTN1-211ENST00000495666 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-211ENST00000495666 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
RFTN1-211ENST00000495666 COBLO75128 1261 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-211ENST00000495666 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-211ENST00000495666 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFTN1-211ENST00000495666 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 HOMER2Q9NSB8 354 aa12.78□□□□□ -0.36
RFTN1-211ENST00000495666 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
RFTN1-211ENST00000495666 ZNF236Q9UL36 1845 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 NDUFB10O96000 172 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-211ENST00000495666 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 FCER1AP12319 257 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-211ENST00000495666 LHX8Q68G74 356 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 LENG1Q96BZ8 264 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-211ENST00000495666 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 INCENPQ9NQS7 918 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 PRDM5Q9NQX1 630 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-211ENST00000495666 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.37
RFTN1-211ENST00000495666 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 F5H6K3 240 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 GNAT2P19087 354 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-211ENST00000495666 KLRC3Q07444 240 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 KCTD2Q14681 263 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
RFTN1-211ENST00000495666 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
RFTN1-211ENST00000495666 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
RFTN1-211ENST00000495666 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 SLF1Q9BQI6 1058 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 MROH8Q9H579 483 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 RAVER2Q9HCJ3 691 aaKnown RBP12.76□□□□□ -0.37
RFTN1-211ENST00000495666 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 MCM3APO60318 1980 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
RFTN1-211ENST00000495666 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
RFTN1-211ENST00000495666 VWA5AO00534 786 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-211ENST00000495666 CYBAP13498 195 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 STAT3P40763 770 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 SNAP25P60880 206 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 PPARAQ07869 468 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 VPS53Q5VIR6 699 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
RFTN1-211ENST00000495666 TSPY2A6NKD2 308 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 NMT2O60551 498 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
RFTN1-211ENST00000495666 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
RFTN1-211ENST00000495666 TFAP4Q01664 338 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 PDE4BQ07343 736 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 ZMYM1Q5SVZ6 1142 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
RFTN1-211ENST00000495666 UBE2OQ9C0C9 1292 aaKnown RBP12.74□□□□□ -0.37
RFTN1-211ENST00000495666 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
RFTN1-211ENST00000495666 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms