RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 MDM2Q00987 491 aaPredicted RBP17.7■□□□□ 0.42
PTPN18-216ENST00000495400 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
PTPN18-216ENST00000495400 MAML3Q96JK9 1138 aa17.7■□□□□ 0.42
PTPN18-216ENST00000495400 STRBPQ96SI9 672 aaKnown RBP17.7■□□□□ 0.42
PTPN18-216ENST00000495400 GOPCQ9HD26 462 aa17.7■□□□□ 0.42
PTPN18-216ENST00000495400 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
PTPN18-216ENST00000495400 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
PTPN18-216ENST00000495400 GREB1LQ9C091 1923 aaPredicted RBP17.69■□□□□ 0.42
PTPN18-216ENST00000495400 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
PTPN18-216ENST00000495400 SBK1Q52WX2 424 aa17.69■□□□□ 0.42
PTPN18-216ENST00000495400 GSG1L2A8MUP6 293 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 RAD21O60216 631 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 RTP1P59025 263 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 ANO1Q5XXA6 986 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 RIOX2Q8IUF8 465 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 DEFB123Q8N688 67 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 SLC17A8Q8NDX2 589 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 MMP19Q99542 508 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
PTPN18-216ENST00000495400 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 FBXO28Q9NVF7 368 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 PPP1R9AQ9ULJ8 1098 aa17.68■□□□□ 0.42
PTPN18-216ENST00000495400 LAMA3Q16787 3333 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 VWA5AO00534 786 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 STAT3P40763 770 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 FAM83BQ5T0W9 1011 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTPN18-216ENST00000495400 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 PRKAG2Q9UGJ0 569 aa17.67■□□□□ 0.42
PTPN18-216ENST00000495400 RNF113AO15541 343 aaKnown RBP17.66■□□□□ 0.42
PTPN18-216ENST00000495400 RASA1P20936 1047 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 COPB2P35606 906 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 KCTD2Q14681 263 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 Q7L0L9 218 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 APPBP2Q92624 585 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 NRBP1Q9UHY1 535 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 ATP11BQ9Y2G3 1177 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 DIS3Q9Y2L1 958 aaKnown RBP17.66■□□□□ 0.42
PTPN18-216ENST00000495400 MYH4Q9Y623 1939 aa17.66■□□□□ 0.42
PTPN18-216ENST00000495400 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
PTPN18-216ENST00000495400 PGK2P07205 417 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 ZFYP08048 801 aaPredicted RBP17.65■□□□□ 0.42
PTPN18-216ENST00000495400 LRRC41Q15345 812 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
PTPN18-216ENST00000495400 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
PTPN18-216ENST00000495400 GNAT2P19087 354 aa17.64■□□□□ 0.41
PTPN18-216ENST00000495400 ZNF792Q3KQV3 632 aa17.64■□□□□ 0.41
PTPN18-216ENST00000495400 FAM47AQ5JRC9 791 aa17.64■□□□□ 0.41
PTPN18-216ENST00000495400 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
PTPN18-216ENST00000495400 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
PTPN18-216ENST00000495400 DNAH12Q6ZR08 3092 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 F5H6K3 240 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 GPAA1O43292 621 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 KLRC3Q07444 240 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 SNX17Q15036 470 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
PTPN18-216ENST00000495400 SLF1Q9BQI6 1058 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 ZNF287Q9HBT7 754 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
PTPN18-216ENST00000495400 APPP05067 770 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 RARBP10826 455 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 TDO2P48775 406 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 LRRFIP1Q32MZ4 808 aaKnown RBP17.62■□□□□ 0.41
PTPN18-216ENST00000495400 TRIM60Q495X7 471 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 C1orf53Q5VUE5 145 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
PTPN18-216ENST00000495400 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
PTPN18-216ENST00000495400 FERMT2Q96AC1 680 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 EPB41L4AQ9HCS5 686 aaPredicted RBP17.62■□□□□ 0.41
PTPN18-216ENST00000495400 XPNPEP3Q9NQH7 507 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 STXBP5LQ9Y2K9 1186 aa17.62■□□□□ 0.41
PTPN18-216ENST00000495400 IGKV6D-41A0A0C4DH26 115 aa17.61■□□□□ 0.41
PTPN18-216ENST00000495400 PATL2C9JE40 543 aaKnown RBP17.61■□□□□ 0.41
PTPN18-216ENST00000495400 NDUFB10O96000 172 aa17.61■□□□□ 0.41
PTPN18-216ENST00000495400 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
PTPN18-216ENST00000495400 SNRNP48Q6IEG0 339 aaKnown RBP17.61■□□□□ 0.41
PTPN18-216ENST00000495400 MKL1Q969V6 931 aa17.61■□□□□ 0.41
PTPN18-216ENST00000495400 TEX13BQ9BXU2 312 aa17.61■□□□□ 0.41
PTPN18-216ENST00000495400 PRDM5Q9NQX1 630 aaPredicted RBP17.61■□□□□ 0.41
PTPN18-216ENST00000495400 PHF24Q9UPV7 400 aa17.61■□□□□ 0.41
PTPN18-216ENST00000495400 M0R2C6 588 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 ZBED4O75132 1171 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 ZNF865P0CJ78 1059 aaPredicted RBP17.6■□□□□ 0.41
PTPN18-216ENST00000495400 AKR1A1P14550 325 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 RNF180Q86T96 592 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 IFNL3Q8IZI9 196 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms