RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 COL11A1P12107 1806 aaPredicted RBP17.61■□□□□ 0.41
PCCB-219ENST00000494742 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 USP17L21D6R901 530 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 APBB1O00213 710 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 LRRC41Q15345 812 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 RIOX2Q8IUF8 465 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 GOPCQ9HD26 462 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 ROBO3Q96MS0 1386 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 PLXNA1Q9UIW2 1896 aa17.6■□□□□ 0.41
PCCB-219ENST00000494742 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
PCCB-219ENST00000494742 ADCYAP1R1P41586 468 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 KCTD2Q14681 263 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 PRAMEF19Q5SWL8 479 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 ANO1Q5XXA6 986 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 CLEC10AQ8IUN9 316 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 GUCD1Q96NT3 240 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 MMP19Q99542 508 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 PHF24Q9UPV7 400 aa17.59■□□□□ 0.41
PCCB-219ENST00000494742 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.41
PCCB-219ENST00000494742 VWA5AO00534 786 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 RARBP10826 455 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 TRIM60Q495X7 471 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 RNF180Q86T96 592 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 TINF2Q9BSI4 451 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 XPNPEP3Q9NQH7 507 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 PRDM5Q9NQX1 630 aaPredicted RBP17.58■□□□□ 0.4
PCCB-219ENST00000494742 PDLIM7Q9NR12 457 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 PPP1R9AQ9ULJ8 1098 aa17.58■□□□□ 0.4
PCCB-219ENST00000494742 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
PCCB-219ENST00000494742 STAT3P40763 770 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 SHHQ15465 462 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 ZNF792Q3KQV3 632 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
PCCB-219ENST00000494742 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
PCCB-219ENST00000494742 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
PCCB-219ENST00000494742 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 SLC4A4Q9Y6R1 1079 aa17.57■□□□□ 0.4
PCCB-219ENST00000494742 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
PCCB-219ENST00000494742 SMCHD1A6NHR9 2005 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
PCCB-219ENST00000494742 SLFNL1Q499Z3 407 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCCB-219ENST00000494742 BADQ92934 168 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
PCCB-219ENST00000494742 LAMA2P24043 3122 aaKnown RBP17.55■□□□□ 0.4
PCCB-219ENST00000494742 AKR1A1P14550 325 aa17.55■□□□□ 0.4
PCCB-219ENST00000494742 SBK1Q52WX2 424 aa17.55■□□□□ 0.4
PCCB-219ENST00000494742 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
PCCB-219ENST00000494742 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
PCCB-219ENST00000494742 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
PCCB-219ENST00000494742 FERMT2Q96AC1 680 aa17.55■□□□□ 0.4
PCCB-219ENST00000494742 TSEN34Q9BSV6 310 aaKnown RBP17.55■□□□□ 0.4
PCCB-219ENST00000494742 TRIM43BA6NCK2 446 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 PGK2P07205 417 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 TLE2Q04725 743 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 C9orf50Q5SZB4 431 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 MIER1Q8N108 512 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 TRIM43Q96BQ3 446 aaPredicted RBP17.54■□□□□ 0.4
PCCB-219ENST00000494742 TEX13BQ9BXU2 312 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
PCCB-219ENST00000494742 NYAP2Q9P242 653 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
PCCB-219ENST00000494742 KIAA0355O15063 1070 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 CLTBP09497 229 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 ZNF865P0CJ78 1059 aaPredicted RBP17.53■□□□□ 0.4
PCCB-219ENST00000494742 FAM83BQ5T0W9 1011 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 SH3RF1Q7Z6J0 888 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 SLF1Q9BQI6 1058 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCCB-219ENST00000494742 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 SEMA6BQ9H3T3 888 aa17.53■□□□□ 0.4
PCCB-219ENST00000494742 SYNGAP1Q96PV0 1343 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 A0A1W2PQ45 241 aaPredicted RBP17.52■□□□□ 0.4
PCCB-219ENST00000494742 A0A1W2PQY0 241 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 ATP2A1O14983 1001 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 PGK1P00558 417 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 MAMDC4Q6UXC1 1216 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 PRPF38AQ8NAV1 312 aaKnown RBP17.52■□□□□ 0.4
PCCB-219ENST00000494742 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 STRBPQ96SI9 672 aaKnown RBP17.52■□□□□ 0.4
PCCB-219ENST00000494742 CDX2Q99626 313 aaPredicted RBP17.52■□□□□ 0.4
PCCB-219ENST00000494742 SYNPO2Q9UMS6 1093 aa17.52■□□□□ 0.4
PCCB-219ENST00000494742 F5H6K3 240 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 RAD21O60216 631 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 ADAMTS4O75173 837 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 CHGBP05060 677 aa17.51■□□□□ 0.39
PCCB-219ENST00000494742 TAL1P17542 331 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms