RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 TRPV1Q8NER1 839 aa26.5■■□□□ 1.83
LYSMD4-208ENST00000493256 STAP2Q9UGK3 403 aa26.5■■□□□ 1.83
LYSMD4-208ENST00000493256 ADAMTS5Q9UNA0 930 aa26.5■■□□□ 1.83
LYSMD4-208ENST00000493256 SZT2Q5T011 3432 aa26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 RAD21O60216 631 aa26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 COBLO75128 1261 aa26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 FAM83BQ5T0W9 1011 aa26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 OLFML2BQ68BL8 750 aa26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 SEC62Q99442 399 aaKnown RBP26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 DDX20Q9UHI6 824 aaKnown RBP26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 ZMYND8Q9ULU4 1186 aaPredicted RBP26.49■■□□□ 1.83
LYSMD4-208ENST00000493256 APPP05067 770 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 CYBAP13498 195 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 MX1P20591 662 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 CNGA1P29973 690 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 ABRAQ8N0Z2 381 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 CRBNQ96SW2 442 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 FSD1Q9BTV5 496 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 PPP1R9AQ9ULJ8 1098 aa26.48■■□□□ 1.83
LYSMD4-208ENST00000493256 PATL2C9JE40 543 aaKnown RBP26.47■■□□□ 1.83
LYSMD4-208ENST00000493256 IFNL3Q8IZI9 196 aa26.47■■□□□ 1.83
LYSMD4-208ENST00000493256 NYAP2Q9P242 653 aa26.47■■□□□ 1.83
LYSMD4-208ENST00000493256 SALL3Q9BXA9 1300 aa26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 VWA5AO00534 786 aa26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 MSCO60682 206 aa26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 PRDM1O75626 825 aa26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 SLC25A27O95847 323 aa26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 NUP88Q99567 741 aaPredicted RBP26.46■■□□□ 1.83
LYSMD4-208ENST00000493256 ZNFX1Q9P2E3 1918 aaKnown RBP26.45■■□□□ 1.83
LYSMD4-208ENST00000493256 IGKV6D-41A0A0C4DH26 115 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 A0A1W2PPC1 479 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 FCER1AP12319 257 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 SYN1P17600 705 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 ZMYM1Q5SVZ6 1142 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 REPS2Q8NFH8 660 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 SLC5A4Q9NY91 659 aa26.45■■□□□ 1.82
LYSMD4-208ENST00000493256 MYH4Q9Y623 1939 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 NDUFB10O96000 172 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 LRRC26Q2I0M4 334 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 RIOX2Q8IUF8 465 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 GDF15Q99988 308 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 NACAP1Q9BZK3 213 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 ZNF287Q9HBT7 754 aa26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 ZNF214Q9UL59 606 aaPredicted RBP26.44■■□□□ 1.82
LYSMD4-208ENST00000493256 F5H6K3 240 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 KLRC3Q07444 240 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 ANKRD45Q5TZF3 282 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 ZNF444Q8N0Y2 327 aaPredicted RBP26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 MAML3Q96JK9 1138 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 MMP19Q99542 508 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 CLIP2Q9UDT6 1046 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 DNAH12Q6ZR08 3092 aa26.43■■□□□ 1.82
LYSMD4-208ENST00000493256 STAT3P40763 770 aa26.42■■□□□ 1.82
LYSMD4-208ENST00000493256 CEP95Q96GE4 821 aa26.42■■□□□ 1.82
LYSMD4-208ENST00000493256 SLF1Q9BQI6 1058 aa26.42■■□□□ 1.82
LYSMD4-208ENST00000493256 LAMA3Q16787 3333 aa26.41■■□□□ 1.82
LYSMD4-208ENST00000493256 SENP6Q9GZR1 1112 aaPredicted RBP26.41■■□□□ 1.82
LYSMD4-208ENST00000493256 NAPBQ9H115 298 aa26.41■■□□□ 1.82
LYSMD4-208ENST00000493256 MTMR4Q9NYA4 1195 aa26.41■■□□□ 1.82
LYSMD4-208ENST00000493256 DNM1LO00429 736 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 PGK2P07205 417 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 BMP8BP34820 402 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 MAGEA10P43363 369 aaPredicted RBP26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 PRAMEF19Q5SWL8 479 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 ANO1Q5XXA6 986 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 ZBTB47Q9UFB7 747 aaPredicted RBP26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 PLIN4Q96Q06 1357 aa26.4■■□□□ 1.82
LYSMD4-208ENST00000493256 FOXP2O15409 715 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 SEPT4O43236 478 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 COPB2P35606 906 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 PPARAQ07869 468 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 HDAC1Q13547 482 aaPredicted RBP26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 KCTD2Q14681 263 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 CCDC129Q6ZRS4 1044 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 MKL1Q969V6 931 aa26.39■■□□□ 1.82
LYSMD4-208ENST00000493256 PLXNA1Q9UIW2 1896 aa26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 PDE4BQ07343 736 aa26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 GJC2Q5T442 439 aaPredicted RBP26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 LRRC47Q8N1G4 583 aaKnown RBP26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 NEDD1Q8NHV4 660 aa26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 TEX13BQ9BXU2 312 aa26.38■■□□□ 1.81
LYSMD4-208ENST00000493256 SOX1O00570 391 aaPredicted RBP26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 TTLL1O95922 423 aa26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 ZNF792Q3KQV3 632 aa26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 FAM47AQ5JRC9 791 aa26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 PRPF38AQ8NAV1 312 aaKnown RBP26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 SYNPO2Q9UMS6 1093 aa26.37■■□□□ 1.81
LYSMD4-208ENST00000493256 SLC3A2P08195 630 aaKnown RBP26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 TSPY3P0CV98 308 aa26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 TSPY8P0CW00 308 aa26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 ATN1P54259 1190 aaPredicted RBP26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 PDE1AP54750 535 aa26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 SNRNP48Q6IEG0 339 aaKnown RBP26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 ARRDC4Q8NCT1 418 aa26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 GMCL1P1Q8NEA9 526 aa26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 DIS3Q9Y2L1 958 aaKnown RBP26.36■■□□□ 1.81
LYSMD4-208ENST00000493256 SMCHD1A6NHR9 2005 aa26.35■■□□□ 1.81
LYSMD4-208ENST00000493256 TFAP4Q01664 338 aa26.35■■□□□ 1.81
LYSMD4-208ENST00000493256 KIFC2Q96AC6 838 aa26.35■■□□□ 1.81
LYSMD4-208ENST00000493256 EVI5LQ96CN4 794 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms