RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
NCSTN-214ENST00000491390 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
NCSTN-214ENST00000491390 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 TFF2Q03403 129 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 FAAP100Q0VG06 881 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 MIER1Q8N108 512 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 SLC44A5Q8NCS7 719 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 PANK1Q8TE04 598 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
NCSTN-214ENST00000491390 TBX21Q9UL17 535 aa13.47□□□□□ -0.25
NCSTN-214ENST00000491390 TCF20Q9UGU0 1960 aaKnown RBP13.47□□□□□ -0.25
NCSTN-214ENST00000491390 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 SPDYE16A6NNV3 312 aaPredicted RBP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 MPHOSPH10O00566 681 aaKnown RBP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 KCNQ1P51787 676 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 KIAA1755Q5JYT7 1200 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 TMEM240Q5SV17 173 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCSTN-214ENST00000491390 KIAA1683Q9H0B3 1180 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 MYO9BQ13459 2157 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 USP34Q70CQ2 3546 aa13.46□□□□□ -0.25
NCSTN-214ENST00000491390 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 A0A1W2PQ45 241 aaPredicted RBP13.45□□□□□ -0.26
NCSTN-214ENST00000491390 A0A1W2PQY0 241 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 ERC2O15083 957 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
NCSTN-214ENST00000491390 TIMP1P01033 207 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 USP14P54578 494 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 MFSD5Q6N075 450 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
NCSTN-214ENST00000491390 EHD4Q9H223 541 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 CABP5Q9NP86 173 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
NCSTN-214ENST00000491390 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
NCSTN-214ENST00000491390 CHGBP05060 677 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 PDE6AP16499 860 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 ADORA2AP29274 412 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 GABPAQ06546 454 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 TANGO6Q9C0B7 1094 aa13.44□□□□□ -0.26
NCSTN-214ENST00000491390 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
NCSTN-214ENST00000491390 ZNF532Q9HCE3 1301 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 GOLIM4O00461 696 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 PRKAB2O43741 272 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 STRNO43815 780 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 COBLO75128 1261 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 IGFBP4P22692 258 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 RAB30Q15771 203 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 PRAMEF19Q5SWL8 479 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 MOV10L1Q9BXT6 1211 aaKnown RBP13.43□□□□□ -0.26
NCSTN-214ENST00000491390 ARMT1Q9H993 441 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 TRIOO75962 3097 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 CFAP54Q96N23 3096 aa13.43□□□□□ -0.26
NCSTN-214ENST00000491390 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 TLL1O43897 1013 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 POU3F3P20264 500 aaPredicted RBP13.42□□□□□ -0.26
NCSTN-214ENST00000491390 MRE11P49959 708 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.26
NCSTN-214ENST00000491390 PLS1Q14651 629 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 HERVK_113Q902F9 699 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
NCSTN-214ENST00000491390 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 NRBP1Q9UHY1 535 aa13.42□□□□□ -0.26
NCSTN-214ENST00000491390 YBX2Q9Y2T7 364 aaKnown RBP13.42□□□□□ -0.26
NCSTN-214ENST00000491390 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
NCSTN-214ENST00000491390 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 AKR1B1P15121 316 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 ERCC3P19447 782 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
NCSTN-214ENST00000491390 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 SHCBP1Q8NEM2 672 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 ATG4CQ96DT6 458 aa13.41□□□□□ -0.26
NCSTN-214ENST00000491390 DCP1AQ9NPI6 582 aaPredicted RBP13.41□□□□□ -0.26
NCSTN-214ENST00000491390 FAM86C2PA6NEL3 165 aa13.4□□□□□ -0.26
NCSTN-214ENST00000491390 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
NCSTN-214ENST00000491390 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
NCSTN-214ENST00000491390 PGK1P00558 417 aa13.4□□□□□ -0.26
NCSTN-214ENST00000491390 CSF2RAP15509 400 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms