RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC9-225ENST00000490851 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 CCDC96Q2M329 555 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 ATL3Q6DD88 541 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 RBSNQ9H1K0 784 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 VAT1LQ9HCJ6 419 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 PCDHA7Q9UN72 937 aa11.59□□□□□ -0.55
HDAC9-225ENST00000490851 SCAF8Q9UPN6 1271 aaKnown RBP11.59□□□□□ -0.55
HDAC9-225ENST00000490851 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 NFKBIEO00221 500 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SPTLC2O15270 562 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SCG2P13521 617 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 CXCL9Q07325 125 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 RINLQ6ZS11 566 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 CKAP2LQ8IYA6 745 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SGSM3Q96HU1 749 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 NUP62CLQ9H1M0 184 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 HDAC9Q9UKV0 1011 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 GDF11O95390 407 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 PARP1P09874 1014 aaKnown RBP11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 PTGER2P43116 358 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 MAP2K1Q02750 393 aaPredicted RBP11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 CABP5Q9NP86 173 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
HDAC9-225ENST00000490851 KRT2P35908 639 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 NT5C2P49902 561 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 TERF1P54274 439 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 NLRP5P59047 1200 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 NOM1Q5C9Z4 860 aaKnown RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 HEATR3Q7Z4Q2 680 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 CSRNP1Q96S65 589 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 PHF20Q9BVI0 1012 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 DHX36Q9H2U1 1008 aaKnown RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 PI4KBQ9UBF8 816 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 ADAMTS3O15072 1205 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 CYTH3O43739 400 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 YEATS4O95619 227 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 ZSCAN20P17040 1043 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 NASPP49321 788 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 SATB1Q01826 763 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 PFKFB3Q16875 520 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 CERKLQ49MI3 558 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 EARS2Q5JPH6 523 aaKnown RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 RBM26Q5T8P6 1007 aaKnown RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 GMLQ99445 158 aa11.57□□□□□ -0.56
HDAC9-225ENST00000490851 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-225ENST00000490851 PALM3A6NDB9 673 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-225ENST00000490851 TTLL1O95922 423 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 GNAQP50148 359 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 CIAPIN1Q6FI81 312 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 ZNF70Q9UC06 446 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-225ENST00000490851 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 PSME4Q14997 1843 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 ZNF500O60304 480 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-225ENST00000490851 TOB1P50616 345 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-225ENST00000490851 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
HDAC9-225ENST00000490851 CLIC6Q96NY7 704 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 EHD4Q9H223 541 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 PCDHB6Q9Y5E3 794 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
HDAC9-225ENST00000490851 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
HDAC9-225ENST00000490851 PDHBP11177 359 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 SLC39A14Q15043 492 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 DDX19AQ9NUU7 478 aaKnown RBP11.55□□□□□ -0.56
HDAC9-225ENST00000490851 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 IGKV6D-41A0A0C4DH26 115 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 NDUFA8P51970 172 aa11.55□□□□□ -0.56
HDAC9-225ENST00000490851 SEPT2Q15019 361 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms