RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DRD2P14416 443 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 LMNB1P20700 586 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ARNTP27540 789 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 CD97P48960 835 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 AMPHP49418 695 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 PSMD2Q13200 908 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 CHRNA2Q15822 529 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 TOM1L2Q6ZVM7 507 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 NME9Q86XW9 330 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ACSBG1Q96GR2 724 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 NECAB3Q96P71 396 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 AK5Q9Y6K8 562 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 CPDO75976 1380 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ALS2Q96Q42 1657 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ASPAP45381 313 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 NFIAQ12857 509 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 MAP7Q14244 749 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 NFKBIBQ15653 356 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 EZH2Q15910 746 aaKnown RBP6.25□□□□□ -1.41
CSTF1-205ENST00000490539 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 RNF43Q68DV7 783 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 NPAS4Q8IUM7 802 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 TRIM42Q8IWZ5 723 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 ANKRD24Q8TF21 1146 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 DBNDD2Q9BQY9 259 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 USP35Q9P2H5 1018 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
CSTF1-205ENST00000490539 NRKQ7Z2Y5 1582 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 COL14A1Q05707 1796 aaKnown RBP6.25□□□□□ -1.41
CSTF1-205ENST00000490539 MARF1Q9Y4F3 1742 aaKnown RBP6.25□□□□□ -1.41
CSTF1-205ENST00000490539 SLIT2O94813 1529 aa6.25□□□□□ -1.41
CSTF1-205ENST00000490539 GLI3P10071 1580 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 USP31Q70CQ4 1352 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-205ENST00000490539 HMX2A2RU54 273 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 ID3Q02535 119 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SGO2Q562F6 1265 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 MAP1SQ66K74 1059 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 ARHGEF25Q86VW2 580 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 TCP11L2Q8N4U5 519 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 C2CD4AQ8NCU7 369 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SYT17Q9BSW7 474 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 ATXN3LQ9H3M9 355 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 PARP2Q9UGN5 583 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 OAS3Q9Y6K5 1087 aaKnown RBP6.24□□□□□ -1.41
CSTF1-205ENST00000490539 NWD2Q9ULI1 1742 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SSH2Q76I76 1423 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SPATA31A5Q5VU36 1347 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 SPATA31A7Q8IWB4 1347 aa6.24□□□□□ -1.41
CSTF1-205ENST00000490539 AKAP12Q02952 1782 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 FYB1O15117 783 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
CSTF1-205ENST00000490539 ECEL1O95672 775 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 CTSBP07858 339 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 LIG1P18858 919 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 GRIK1P39086 918 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 GP2P55259 537 aaKnown RBP6.23□□□□□ -1.41
CSTF1-205ENST00000490539 LLGL2Q6P1M3 1020 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 FBLIM1Q8WUP2 373 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 WDR18Q9BV38 432 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 CCDC86Q9H6F5 360 aaKnown RBP6.23□□□□□ -1.41
CSTF1-205ENST00000490539 PANK3Q9H999 370 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 ATG3Q9NT62 314 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 CYP8B1Q9UNU6 501 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 NSD3Q9BZ95 1437 aa6.23□□□□□ -1.41
CSTF1-205ENST00000490539 PDE4DIPQ5VU43 2346 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 RGPD1P0DJD0 1748 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 MON2Q7Z3U7 1717 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 NSD2O96028 1365 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 CCER2I3L3R5 266 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 FBXO24O75426 580 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 RLBP1P12271 317 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 RAB6AP20340 208 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 RGS19P49795 217 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 DAB2P98082 770 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 CCDC85BQ15834 202 aaPredicted RBP6.22□□□□□ -1.41
CSTF1-205ENST00000490539 KIF4BQ2VIQ3 1234 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 KRT27Q7Z3Y8 459 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 MORC1Q86VD1 984 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 IP6K1Q92551 441 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 PICK1Q9NRD5 415 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 MYOM1P52179 1685 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 CRB1P82279 1406 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 ATP10DQ9P241 1426 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 SPATA31A1Q5TZJ5 1347 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
CSTF1-205ENST00000490539 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.22□□□□□ -1.41
CSTF1-205ENST00000490539 CD163L1Q9NR16 1453 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms