RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 C7orf61Q8IZ16 206 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 REPS2Q8NFH8 660 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MROH8Q9H579 483 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 STAP2Q9UGK3 403 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 CYBAP13498 195 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 GNAT2P19087 354 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 OLFML2BQ68BL8 750 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 DPP9Q86TI2 863 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 IFNL3Q8IZI9 196 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 CRBNQ96SW2 442 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 NYAP2Q9P242 653 aa23.23■■□□□ 1.31
TNFRSF1B-202ENST00000489921 PLS1Q14651 629 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ZMYM1Q5SVZ6 1142 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 FAM83BQ5T0W9 1011 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ABRAQ8N0Z2 381 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 GDF15Q99988 308 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MKNK2Q9HBH9 465 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 GOPCQ9HD26 462 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 DDX20Q9UHI6 824 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 PPP1R9AQ9ULJ8 1098 aa23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 LAMA2P24043 3122 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1B-202ENST00000489921 VWA5AO00534 786 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ERC2O15083 957 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 FOXP2O15409 715 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MX1P20591 662 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 SAMD1Q6SPF0 538 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 NCAPG2Q86XI2 1143 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 NUP88Q99567 741 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ZNF214Q9UL59 606 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ZMYND8Q9ULU4 1186 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 PLXNA1Q9UIW2 1896 aa23.21■■□□□ 1.31
TNFRSF1B-202ENST00000489921 PRDM1O75626 825 aa23.2■■□□□ 1.3
TNFRSF1B-202ENST00000489921 LRRC26Q2I0M4 334 aa23.2■■□□□ 1.3
TNFRSF1B-202ENST00000489921 F5H6K3 240 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SLC25A27O95847 323 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 APPP05067 770 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 CNGA1P29973 690 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 TDO2P48775 406 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 KLRC3Q07444 240 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 RIOX2Q8IUF8 465 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 MKL1Q969V6 931 aa23.19■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SMCHD1A6NHR9 2005 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 A0A1W2PPC1 479 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 NDUFB10O96000 172 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SYN1P17600 705 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 BMP8BP34820 402 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 MAML3Q96JK9 1138 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 FSD1Q9BTV5 496 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 CLIP2Q9UDT6 1046 aa23.18■■□□□ 1.3
TNFRSF1B-202ENST00000489921 RAD21O60216 631 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 MSCO60682 206 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 FCER1AP12319 257 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 STAT3P40763 770 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 PRAMEF19Q5SWL8 479 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 ANKRD45Q5TZF3 282 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 CEP95Q96GE4 821 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 MTMR4Q9NYA4 1195 aa23.17■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SOX1O00570 391 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1B-202ENST00000489921 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1B-202ENST00000489921 PLIN4Q96Q06 1357 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 COL6A3P12111 3177 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 PGK2P07205 417 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 CCDC129Q6ZRS4 1044 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 ZNF444Q8N0Y2 327 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 NEDD1Q8NHV4 660 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SLF1Q9BQI6 1058 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SLC5A4Q9NY91 659 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 TACC3Q9Y6A5 838 aa23.15■■□□□ 1.3
TNFRSF1B-202ENST00000489921 SEPT4O43236 478 aa23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 MAGEA10P43363 369 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 PPARAQ07869 468 aa23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ANO1Q5XXA6 986 aa23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 MMP19Q99542 508 aa23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 SENP6Q9GZR1 1112 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 RIPK3Q9Y572 518 aa23.14■■□□□ 1.29
TNFRSF1B-202ENST00000489921 DNM1LO00429 736 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 PDE1AP54750 535 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 FAM47AQ5JRC9 791 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 GJC2Q5T442 439 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 PRPF38AQ8NAV1 312 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 NACAP1Q9BZK3 213 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 NAPBQ9H115 298 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ZNF287Q9HBT7 754 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 INCENPQ9NQS7 918 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 SYNPO2Q9UMS6 1093 aa23.13■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TTLL1O95922 423 aa23.12■■□□□ 1.29
TNFRSF1B-202ENST00000489921 VPS53Q5VIR6 699 aa23.12■■□□□ 1.29
TNFRSF1B-202ENST00000489921 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
TNFRSF1B-202ENST00000489921 DIS3Q9Y2L1 958 aaKnown RBP23.12■■□□□ 1.29
TNFRSF1B-202ENST00000489921 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.12■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ATP2A1O14983 1001 aa23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TFAP4Q01664 338 aa23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 EVI5LQ96CN4 794 aa23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 LRCH3Q96II8 777 aa23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TINF2Q9BSI4 451 aa23.11■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TAL1P17542 331 aaPredicted RBP23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 CTDSPL2Q05D32 466 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms