RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 EEF2P13639 858 aaKnown RBP14.91□□□□□ -0.02
CPSF3-204ENST00000489403 GJC2Q5T442 439 aaPredicted RBP14.91□□□□□ -0.02
CPSF3-204ENST00000489403 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
CPSF3-204ENST00000489403 ABRAQ8N0Z2 381 aa14.91□□□□□ -0.02
CPSF3-204ENST00000489403 DEFB123Q8N688 67 aa14.91□□□□□ -0.02
CPSF3-204ENST00000489403 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
CPSF3-204ENST00000489403 MAML3Q96JK9 1138 aa14.91□□□□□ -0.02
CPSF3-204ENST00000489403 RTP1P59025 263 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 PRAMEF19Q5SWL8 479 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 ZSCAN25Q6NSZ9 544 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 SLC17A8Q8NDX2 589 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 KANSL2Q9H9L4 492 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 FBXO28Q9NVF7 368 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
CPSF3-204ENST00000489403 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 PLXNA1Q9UIW2 1896 aa14.9□□□□□ -0.02
CPSF3-204ENST00000489403 KBTBD13C9JR72 458 aa14.89□□□□□ -0.03
CPSF3-204ENST00000489403 SLC25A27O95847 323 aa14.89□□□□□ -0.03
CPSF3-204ENST00000489403 FCER1AP12319 257 aa14.89□□□□□ -0.03
CPSF3-204ENST00000489403 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
CPSF3-204ENST00000489403 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 FAM83BQ5T0W9 1011 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 SLC39A5Q6ZMH5 540 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 REPS2Q8NFH8 660 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 STRBPQ96SI9 672 aaKnown RBP14.88□□□□□ -0.03
CPSF3-204ENST00000489403 MMP19Q99542 508 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 ECHDC1Q9NTX5 307 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 MTMR10Q9NXD2 777 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
CPSF3-204ENST00000489403 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
CPSF3-204ENST00000489403 ROBO3Q96MS0 1386 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 VWA5AO00534 786 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 RAD21O60216 631 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-204ENST00000489403 LRRC41Q15345 812 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 SBK1Q52WX2 424 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 KBTBD3Q8NAB2 608 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 OSBP2Q969R2 916 aa14.87□□□□□ -0.03
CPSF3-204ENST00000489403 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-204ENST00000489403 LAMA2P24043 3122 aaKnown RBP14.87□□□□□ -0.03
CPSF3-204ENST00000489403 GSG1L2A8MUP6 293 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 PGK2P07205 417 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 RASA1P20936 1047 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 STAT3P40763 770 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 SNX17Q15036 470 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 ZNF792Q3KQV3 632 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 STK11IPQ8N1F8 1099 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 EPB41L4AQ9HCS5 686 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-204ENST00000489403 PRKAG2Q9UGJ0 569 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 STXBP5LQ9Y2K9 1186 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 SMCHD1A6NHR9 2005 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 MYH4Q9Y623 1939 aa14.86□□□□□ -0.03
CPSF3-204ENST00000489403 KCTD2Q14681 263 aa14.85□□□□□ -0.03
CPSF3-204ENST00000489403 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
CPSF3-204ENST00000489403 APPBP2Q92624 585 aa14.85□□□□□ -0.03
CPSF3-204ENST00000489403 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
CPSF3-204ENST00000489403 NRBP1Q9UHY1 535 aa14.85□□□□□ -0.03
CPSF3-204ENST00000489403 DIS3Q9Y2L1 958 aaKnown RBP14.85□□□□□ -0.03
CPSF3-204ENST00000489403 MINDY4BA8MYZ0 360 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 GPAA1O43292 621 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 TAL1P17542 331 aaPredicted RBP14.84□□□□□ -0.03
CPSF3-204ENST00000489403 COPB2P35606 906 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 ADCYAP1R1P41586 468 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 DCTPP1Q9H773 170 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 MKNK2Q9HBH9 465 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 PRDM5Q9NQX1 630 aaPredicted RBP14.84□□□□□ -0.03
CPSF3-204ENST00000489403 PDLIM7Q9NR12 457 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
CPSF3-204ENST00000489403 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 F5H6K3 240 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 POTEB2H3BUK9 544 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 M0R2C6 588 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 DLL1O00548 723 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.04
CPSF3-204ENST00000489403 NDUFB10O96000 172 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 RARBP10826 455 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 KLRC3Q07444 240 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 C1orf53Q5VUE5 145 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 GPATCH3Q96I76 525 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 PHF24Q9UPV7 400 aa14.83□□□□□ -0.04
CPSF3-204ENST00000489403 TRIM43BA6NCK2 446 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 PGK1P00558 417 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 ZNF865P0CJ78 1059 aaPredicted RBP14.82□□□□□ -0.04
CPSF3-204ENST00000489403 AKR1A1P14550 325 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 TDO2P48775 406 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 SNRNP48Q6IEG0 339 aaKnown RBP14.82□□□□□ -0.04
CPSF3-204ENST00000489403 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 BADQ92934 168 aa14.82□□□□□ -0.04
CPSF3-204ENST00000489403 TRIM43Q96BQ3 446 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms