RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 SWAP70Q9UH65 585 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 NID2Q14112 1375 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 ATRNL1Q5VV63 1379 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 A0A1B0GVL5 298 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 CACNB3P54284 484 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 ZNF280AP59817 542 aaPredicted RBP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 TCP10Q12799 353 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 FAM47AQ5JRC9 791 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 FMR1NBQ8N0W7 255 aaPredicted RBP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 LY9Q9HBG7 655 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 CALCOCO1Q9P1Z2 691 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 PCDHA7Q9UN72 937 aa10.3□□□□□ -0.76
EXOSC1-211ENST00000489158 TNKSO95271 1327 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 CPLX1O14810 134 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 MYO1BO43795 1136 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 RXRAP19793 462 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 FAM193AP78312 1265 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 NFIAQ12857 509 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 ATL3Q6DD88 541 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 ZSCAN29Q8IWY8 852 aaPredicted RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 TDRD3Q9H7E2 651 aaKnown RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 NCOA5Q9HCD5 579 aaKnown RBP10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 TCP11L1Q9NUJ3 509 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 SLC12A7Q9Y666 1083 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 PLIN4Q96Q06 1357 aa10.29□□□□□ -0.76
EXOSC1-211ENST00000489158 TSPY3P0CV98 308 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 TSPY8P0CW00 308 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SFPQP23246 707 aaKnown RBP eCLIP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 PLA2G4AP47712 749 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 PRELPP51888 382 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 DPCR1Q3MIW9 517 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SLC44A5Q8NCS7 719 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 PRMT6Q96LA8 375 aaPredicted RBP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SENP2Q9HC62 589 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SERPINB13Q9UIV8 391 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 GJA3Q9Y6H8 435 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 ZBTB43O43298 467 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 PNMA6AP0CW24 399 aaPredicted RBP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 CYP2C19P33261 490 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 CDK8P49336 464 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 NDUFA8P51970 172 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 TFAP4Q01664 338 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 GABPAQ06546 454 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 SEC23AQ15436 765 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 ZRSR1Q15695 479 aaKnown RBP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 GPC2Q8N158 579 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 MYL10Q9BUA6 226 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 MYOZ2Q9NPC6 264 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 KIAA1468Q9P260 1216 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
EXOSC1-211ENST00000489158 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 BIN1O00499 593 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CALM1P0DP23 149 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CALM2P0DP24 149 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CALM3P0DP25 149 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CPLX2Q6PUV4 134 aaKnown RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 FAM83AQ86UY5 434 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 DGKHQ86XP1 1220 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CREBRFQ8IUR6 639 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 FOXP4Q8IVH2 680 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 NUP133Q8WUM0 1156 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 PI4KBQ9UBF8 816 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ZNF70Q9UC06 446 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 DNAI1Q9UI46 699 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 GREB1LQ9C091 1923 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 GOLGA8AA7E2F4 631 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 NMT2O60551 498 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CDKL5O76039 1030 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 RASA1P20936 1047 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 GMPSP49915 693 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ADALQ6DHV7 355 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 BPIFA3Q9BQP9 254 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 RTEL1Q9NZ71 1219 aa10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ORC3Q9UBD5 711 aaPredicted RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 ZC3H4Q9UPT8 1303 aaKnown RBP10.27□□□□□ -0.77
EXOSC1-211ENST00000489158 CCDC196A0A1B0GTZ2 297 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 NRDCO43847 1150 aa10.26□□□□□ -0.77
EXOSC1-211ENST00000489158 DDAH1O94760 285 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms