RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 PDXDC2PQ6P474 469 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 TXNRD3Q86VQ6 643 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 CDK5RAP2Q96SN8 1893 aa16.13■□□□□ 0.17
ABCB1-207ENST00000488737 XDHP47989 1333 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
ABCB1-207ENST00000488737 BAG3O95817 575 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 PBX1P40424 430 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 USP5P45974 858 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 TFAP4Q01664 338 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 GRAPQ13588 217 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 FILIP1LQ4L180 1135 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 PNMA1Q8ND90 353 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 GRAPLQ8TC17 118 aaPredicted RBP16.12■□□□□ 0.17
ABCB1-207ENST00000488737 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
ABCB1-207ENST00000488737 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 LDHCP07864 332 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 TXLNAP40222 546 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 C4orf32Q8N8J7 132 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
ABCB1-207ENST00000488737 RMND1Q9NWS8 449 aa16.12■□□□□ 0.17
ABCB1-207ENST00000488737 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
ABCB1-207ENST00000488737 SPAG1Q07617 926 aa16.11■□□□□ 0.17
ABCB1-207ENST00000488737 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
ABCB1-207ENST00000488737 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
ABCB1-207ENST00000488737 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 MCM7P33993 719 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ADKP55263 362 aaKnown RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 IL17AQ16552 155 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 PTF1AQ7RTS3 328 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 CCDC51Q96ER9 411 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 LZTS2Q9BRK4 669 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ZMYND15Q9H091 742 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 RGS17Q9UGC6 210 aaPredicted RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 RWDD2AQ9UIY3 292 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 V9GYY5 206 aaPredicted RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 MYH1P12882 1939 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 M0R2N6 131 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 H2AFXP16104 143 aaPredicted RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 UTP14CQ5TAP6 766 aaKnown RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 MKNK2Q9HBH9 465 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 LIMA1Q9UHB6 759 aaKnown RBP16.1■□□□□ 0.17
ABCB1-207ENST00000488737 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 PARP3Q9Y6F1 533 aa16.1■□□□□ 0.17
ABCB1-207ENST00000488737 TEX33O43247 280 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
ABCB1-207ENST00000488737 RXRBP28702 533 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 CASP1P29466 404 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 STX17P56962 302 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 ZNF658Q5TYW1 1059 aaPredicted RBP16.09■□□□□ 0.17
ABCB1-207ENST00000488737 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
ABCB1-207ENST00000488737 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
ABCB1-207ENST00000488737 FAM205AQ6ZU69 1335 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 LAD1O00515 517 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 NPHP1O15259 732 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 MYL1P05976 194 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 TPM1P09493 284 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 TSPY3P0CV98 308 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 TSPY8P0CW00 308 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.17
ABCB1-207ENST00000488737 FECHP22830 423 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 POTEAQ6S8J7 498 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 TOGARAM2Q6ZUX3 1019 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.17
ABCB1-207ENST00000488737 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.17
ABCB1-207ENST00000488737 CCDC194A0A1B0GVG4 234 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
ABCB1-207ENST00000488737 CCDC175P0C221 793 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 CASQ1P31415 396 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 RFC4P35249 363 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 PAK1Q13153 545 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 CNGA4Q8IV77 575 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 SMYD4Q8IYR2 804 aaPredicted RBP16.08■□□□□ 0.16
ABCB1-207ENST00000488737 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
ABCB1-207ENST00000488737 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms