RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 SLC4A4Q9Y6R1 1079 aa18.26■□□□□ 0.51
NELFA-215ENST00000488452 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
NELFA-215ENST00000488452 CHGBP05060 677 aa18.25■□□□□ 0.51
NELFA-215ENST00000488452 EEF2P13639 858 aaKnown RBP18.25■□□□□ 0.51
NELFA-215ENST00000488452 COL6A3P12111 3177 aa18.24■□□□□ 0.51
NELFA-215ENST00000488452 MYH8P13535 1937 aa18.24■□□□□ 0.51
NELFA-215ENST00000488452 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
NELFA-215ENST00000488452 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
NELFA-215ENST00000488452 FAM109BQ6ICB4 259 aaPredicted RBP18.24■□□□□ 0.51
NELFA-215ENST00000488452 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
NELFA-215ENST00000488452 RIOX2Q8IUF8 465 aa18.24■□□□□ 0.51
NELFA-215ENST00000488452 BAZ2AQ9UIF9 1905 aaKnown RBP18.23■□□□□ 0.51
NELFA-215ENST00000488452 ADCYAP1R1P41586 468 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 LRRC41Q15345 812 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 MMP19Q99542 508 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 PUS7LQ9H0K6 701 aaKnown RBP18.23■□□□□ 0.51
NELFA-215ENST00000488452 GOPCQ9HD26 462 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
NELFA-215ENST00000488452 VWA5AO00534 786 aa18.22■□□□□ 0.51
NELFA-215ENST00000488452 STAT3P40763 770 aa18.22■□□□□ 0.51
NELFA-215ENST00000488452 KCTD2Q14681 263 aa18.22■□□□□ 0.51
NELFA-215ENST00000488452 SNX17Q15036 470 aa18.22■□□□□ 0.51
NELFA-215ENST00000488452 PPP1R9AQ9ULJ8 1098 aa18.22■□□□□ 0.51
NELFA-215ENST00000488452 DIS3Q9Y2L1 958 aaKnown RBP18.22■□□□□ 0.51
NELFA-215ENST00000488452 RAD21O60216 631 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 PGK2P07205 417 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 ZNF792Q3KQV3 632 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 TRIM60Q495X7 471 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 TINF2Q9BSI4 451 aa18.21■□□□□ 0.51
NELFA-215ENST00000488452 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
NELFA-215ENST00000488452 DNAH12Q6ZR08 3092 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 ZNFX1Q9P2E3 1918 aaKnown RBP18.2■□□□□ 0.5
NELFA-215ENST00000488452 RARBP10826 455 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 COPB2P35606 906 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 FAM83BQ5T0W9 1011 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 C1orf53Q5VUE5 145 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 STRBPQ96SI9 672 aaKnown RBP18.2■□□□□ 0.5
NELFA-215ENST00000488452 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
NELFA-215ENST00000488452 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
NELFA-215ENST00000488452 PRDM5Q9NQX1 630 aaPredicted RBP18.2■□□□□ 0.5
NELFA-215ENST00000488452 PARP14Q460N5 1801 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
NELFA-215ENST00000488452 SHHQ15465 462 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 REPS2Q8NFH8 660 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 BADQ92934 168 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 ECHDC1Q9NTX5 307 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 RCAN3Q9UKA8 241 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 ZNF214Q9UL59 606 aaPredicted RBP18.19■□□□□ 0.5
NELFA-215ENST00000488452 PHF24Q9UPV7 400 aa18.19■□□□□ 0.5
NELFA-215ENST00000488452 GIMAP6Q6P9H5 292 aa18.18■□□□□ 0.5
NELFA-215ENST00000488452 RNF180Q86T96 592 aa18.18■□□□□ 0.5
NELFA-215ENST00000488452 SLF1Q9BQI6 1058 aa18.18■□□□□ 0.5
NELFA-215ENST00000488452 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
NELFA-215ENST00000488452 NYAP2Q9P242 653 aa18.18■□□□□ 0.5
NELFA-215ENST00000488452 MYH7P12883 1935 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
NELFA-215ENST00000488452 TRIM43BA6NCK2 446 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 GSG1L2A8MUP6 293 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
NELFA-215ENST00000488452 RASA1P20936 1047 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 TLE2Q04725 743 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 C9orf50Q5SZB4 431 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 TRIM43Q96BQ3 446 aaPredicted RBP18.17■□□□□ 0.5
NELFA-215ENST00000488452 FAM161BQ96MY7 647 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 GUCD1Q96NT3 240 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 TACC3Q9Y6A5 838 aa18.17■□□□□ 0.5
NELFA-215ENST00000488452 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 F5H6K3 240 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 PGK1P00558 417 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
NELFA-215ENST00000488452 AKR1A1P14550 325 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 KLRC3Q07444 240 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 ZNF697Q5TEC3 545 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
NELFA-215ENST00000488452 KBTBD3Q8NAB2 608 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
NELFA-215ENST00000488452 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
NELFA-215ENST00000488452 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
NELFA-215ENST00000488452 RNF113AO15541 343 aaKnown RBP18.15■□□□□ 0.5
NELFA-215ENST00000488452 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
NELFA-215ENST00000488452 OSBP2Q969R2 916 aa18.15■□□□□ 0.5
NELFA-215ENST00000488452 DDX11Q96FC9 970 aa18.15■□□□□ 0.5
NELFA-215ENST00000488452 CLIP2Q9UDT6 1046 aa18.15■□□□□ 0.5
NELFA-215ENST00000488452 NDUFB10O96000 172 aa18.14■□□□□ 0.49
NELFA-215ENST00000488452 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.49
NELFA-215ENST00000488452 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
NELFA-215ENST00000488452 APPBP2Q92624 585 aa18.14■□□□□ 0.49
NELFA-215ENST00000488452 TSEN34Q9BSV6 310 aaKnown RBP18.14■□□□□ 0.49
NELFA-215ENST00000488452 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms