RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 CYBAP13498 195 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
VAMP7-206ENST00000488344 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-206ENST00000488344 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 TDHQ8IZJ6 230 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 MKNK2Q9HBH9 465 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 NRBP1Q9UHY1 535 aa13.45□□□□□ -0.26
VAMP7-206ENST00000488344 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SEPT4O43236 478 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 RAD21O60216 631 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SYN1P17600 705 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 KCTD2Q14681 263 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 LRRC26Q2I0M4 334 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 LRIT3Q3SXY7 679 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 RIOX2Q8IUF8 465 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SIAH1Q8IUQ4 282 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
VAMP7-206ENST00000488344 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-206ENST00000488344 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
VAMP7-206ENST00000488344 SENP6Q9GZR1 1112 aaPredicted RBP13.44□□□□□ -0.26
VAMP7-206ENST00000488344 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 DOCK3Q8IZD9 2030 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
VAMP7-206ENST00000488344 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
VAMP7-206ENST00000488344 IGHA2P01877 340 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 MMP19Q99542 508 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 NYAP2Q9P242 653 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 SYNPO2Q9UMS6 1093 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 ADAMTS5Q9UNA0 930 aa13.43□□□□□ -0.26
VAMP7-206ENST00000488344 DIS3Q9Y2L1 958 aaKnown RBP13.43□□□□□ -0.26
VAMP7-206ENST00000488344 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
VAMP7-206ENST00000488344 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
VAMP7-206ENST00000488344 VWA5AO00534 786 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 COBLO75128 1261 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 SLC3A2P08195 630 aaKnown RBP13.42□□□□□ -0.26
VAMP7-206ENST00000488344 STAT3P40763 770 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 TDO2P48775 406 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 TMEM132BQ14DG7 1078 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 MAML3Q96JK9 1138 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
VAMP7-206ENST00000488344 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
VAMP7-206ENST00000488344 RANBP2P49792 3224 aaKnown RBP13.41□□□□□ -0.26
VAMP7-206ENST00000488344 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 GPAA1O43292 621 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 CHGBP05060 677 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 APPP05067 770 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 RASA1P20936 1047 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 ZNF444Q8N0Y2 327 aaPredicted RBP13.41□□□□□ -0.26
VAMP7-206ENST00000488344 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 OSBP2Q969R2 916 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 TEX13BQ9BXU2 312 aa13.41□□□□□ -0.26
VAMP7-206ENST00000488344 SOX1O00570 391 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-206ENST00000488344 RARBP10826 455 aa13.4□□□□□ -0.26
VAMP7-206ENST00000488344 PDE4BQ07343 736 aa13.4□□□□□ -0.26
VAMP7-206ENST00000488344 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
VAMP7-206ENST00000488344 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
VAMP7-206ENST00000488344 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
VAMP7-206ENST00000488344 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
VAMP7-206ENST00000488344 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
VAMP7-206ENST00000488344 F5H6K3 240 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 ZBED4O75132 1171 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 FDX1P10109 184 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-206ENST00000488344 RTP1P59025 263 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 KLRC3Q07444 240 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-206ENST00000488344 RNF180Q86T96 592 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
VAMP7-206ENST00000488344 ZNF214Q9UL59 606 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-206ENST00000488344 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
VAMP7-206ENST00000488344 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 TTLL1O95922 423 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 AKR1A1P14550 325 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
VAMP7-206ENST00000488344 LRRC41Q15345 812 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 SNRNP48Q6IEG0 339 aaKnown RBP13.38□□□□□ -0.27
VAMP7-206ENST00000488344 DEFB123Q8N688 67 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms