RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 SLC39A14Q15043 492 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 TBC1D10BQ4KMP7 808 aaPredicted RBP10.45□□□□□ -0.74
USP16-206ENST00000485067 TTC19Q6DKK2 380 aaPredicted RBP10.45□□□□□ -0.74
USP16-206ENST00000485067 MFSD6Q6ZSS7 791 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 STK11IPQ8N1F8 1099 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 STAG1Q8WVM7 1258 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 TAF4BQ92750 862 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 TEKT1Q969V4 418 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 GJB4Q9NTQ9 266 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 TMOD4Q9NZQ9 345 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 SLC12A7Q9Y666 1083 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 NEDD4P46934 1319 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 SHTN1A0MZ66 631 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 CCDC69A6NI79 296 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 GOLGA8AA7E2F4 631 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 GNPATO15228 680 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 ABL2P42684 1182 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 NDUFA8P51970 172 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 OTUD7BQ6GQQ9 843 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 ARMT1Q9H993 441 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
USP16-206ENST00000485067 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 COL1A1P02452 1464 aaPredicted RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 CCDC194A0A1B0GVG4 234 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 A0A1B0GVL5 298 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 IFIT3O14879 490 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 PARNO95453 639 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 IMPDH2P12268 514 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 RXRAP19793 462 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 PTGS1P23219 599 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 U2AF2P26368 475 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP16-206ENST00000485067 RBM6P78332 1123 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 SSRP1Q08945 709 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 GNL2Q13823 731 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 NTRK3Q16288 839 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 PDCD2Q16342 344 aaPredicted RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 KRT40Q6A162 431 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 C11orf57Q6ZUT1 292 aaPredicted RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 CCDC186Q7Z3E2 898 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 ZSWIM5Q9P217 1185 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 ERICH2A1L162 156 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 KIF28PB7ZC32 967 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 IFNAR1P17181 557 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 RWDD2BP57060 319 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 POU5F1Q01860 360 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 PPP2R5BQ15173 497 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 MCTP2Q6DN12 878 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 MICU3Q86XE3 530 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 VPS37DQ86XT2 251 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 FMNL3Q8IVF7 1028 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 DHX40Q8IX18 779 aaKnown RBP10.44□□□□□ -0.74
USP16-206ENST00000485067 MIGA1Q8NAN2 632 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 LRP2BPQ9P2M1 347 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 SLC4A4Q9Y6R1 1079 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
USP16-206ENST00000485067 FAM237AA0A1B0GTK4 181 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 XBP1P17861 261 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 CDC27P30260 824 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 UBE4AQ14139 1066 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 DHX8Q14562 1220 aaKnown RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 SF3B3Q15393 1217 aaKnown RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 KCNV1Q6PIU1 500 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 MYLK4Q86YV6 388 aaPredicted RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 SUGP1Q8IWZ8 645 aaKnown RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 CCNL1Q9UK58 526 aaPredicted RBP10.43□□□□□ -0.74
USP16-206ENST00000485067 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
USP16-206ENST00000485067 TPPPO94811 219 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 ZNF202O95125 648 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 SLC3A2P08195 630 aaKnown RBP10.42□□□□□ -0.74
USP16-206ENST00000485067 TPM4P67936 248 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 WTAPQ15007 396 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 ANKRD18AQ8IVF6 992 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 TRIM22Q8IYM9 498 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 STAG2Q8N3U4 1231 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 CCDC26Q8TAB7 109 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
USP16-206ENST00000485067 THSD7AQ9UPZ6 1657 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 CNTNAP4Q9C0A0 1308 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 UBE2Q2LH0YL09 131 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 PCP11498 1178 aaKnown RBP10.42□□□□□ -0.74
USP16-206ENST00000485067 PFKFB1P16118 471 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 LMNB1P20700 586 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 HSPA1LP34931 641 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 NLRP12P59046 1061 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 EVX2Q03828 476 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP16-206ENST00000485067 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
USP16-206ENST00000485067 CCDC47Q96A33 483 aaKnown RBP10.42□□□□□ -0.74
USP16-206ENST00000485067 THOC1Q96FV9 657 aaKnown RBP10.42□□□□□ -0.74
USP16-206ENST00000485067 LRRC4BQ9NT99 713 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms