RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ZNF792Q3KQV3 632 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 SBK1Q52WX2 424 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16■□□□□ 0.15
ABCF1-206ENST00000479542 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 TINF2Q9BSI4 451 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 PHF24Q9UPV7 400 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 LAMA2P24043 3122 aaKnown RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 VWA5AO00534 786 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 PRKAB2O43741 272 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 STAT3P40763 770 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 ARPP21Q9UBL0 812 aaPredicted RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 ZNF214Q9UL59 606 aaPredicted RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 PPP1R9AQ9ULJ8 1098 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 SYNPO2Q9UMS6 1093 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 TACC3Q9Y6A5 838 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 ZNFX1Q9P2E3 1918 aaKnown RBP15.99■□□□□ 0.15
ABCF1-206ENST00000479542 CUL9Q8IWT3 2517 aa15.99■□□□□ 0.15
ABCF1-206ENST00000479542 PARP14Q460N5 1801 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 ATP2A1O14983 1001 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 PLS1Q14651 629 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 KCTD2Q14681 263 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 RNF180Q86T96 592 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 SPICE1Q8N0Z3 855 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 REPS2Q8NFH8 660 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 PDLIM7Q9NR12 457 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 ATP11BQ9Y2G3 1177 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 MYH8P13535 1937 aa15.98■□□□□ 0.15
ABCF1-206ENST00000479542 LTBP2Q14767 1821 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 TMEM265A0A087WTH1 108 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 RARBP10826 455 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 ADCYAP1R1P41586 468 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 MAMDC4Q6UXC1 1216 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 TOX2Q96NM4 488 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 GUCD1Q96NT3 240 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 MMP19Q99542 508 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 SLC4A4Q9Y6R1 1079 aa15.97■□□□□ 0.15
ABCF1-206ENST00000479542 UNC80Q8N2C7 3258 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 SMCHD1A6NHR9 2005 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 KIAA0355O15063 1070 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 ZNF865P0CJ78 1059 aaPredicted RBP15.96■□□□□ 0.15
ABCF1-206ENST00000479542 AKR1A1P14550 325 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 SHHQ15465 462 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 PRAMEF19Q5SWL8 479 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 ZNF697Q5TEC3 545 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 ZNF467Q7Z7K2 595 aaPredicted RBP15.96■□□□□ 0.15
ABCF1-206ENST00000479542 STRBPQ96SI9 672 aaKnown RBP15.96■□□□□ 0.15
ABCF1-206ENST00000479542 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
ABCF1-206ENST00000479542 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 PUS7LQ9H0K6 701 aaKnown RBP15.96■□□□□ 0.15
ABCF1-206ENST00000479542 XPNPEP3Q9NQH7 507 aa15.96■□□□□ 0.15
ABCF1-206ENST00000479542 BAZ2AQ9UIF9 1905 aaKnown RBP15.96■□□□□ 0.14
ABCF1-206ENST00000479542 SYNGAP1Q96PV0 1343 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 TRIM60Q495X7 471 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 ANKRD33Q7Z3H0 272 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 PRPF38AQ8NAV1 312 aaKnown RBP15.95■□□□□ 0.14
ABCF1-206ENST00000479542 MKL1Q969V6 931 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 TEX13BQ9BXU2 312 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 SEMA6BQ9H3T3 888 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 ZNF287Q9HBT7 754 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
ABCF1-206ENST00000479542 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 MOXD2PA6NHM9 499 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 APBB1O00213 710 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 FDX1P10109 184 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 TLE2Q04725 743 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 ANO1Q5XXA6 986 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 CLEC10AQ8IUN9 316 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 BADQ92934 168 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 TRIM43Q96BQ3 446 aaPredicted RBP15.94■□□□□ 0.14
ABCF1-206ENST00000479542 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
ABCF1-206ENST00000479542 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
ABCF1-206ENST00000479542 GSG1L2A8MUP6 293 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 F5H6K3 240 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 SMIM22K7EJ46 135 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 ADAMTS4O75173 837 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 ZFYP08048 801 aaPredicted RBP15.93■□□□□ 0.14
ABCF1-206ENST00000479542 CLTBP09497 229 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 GNAT2P19087 354 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 RASA1P20936 1047 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 CST5P28325 142 aaPredicted RBP15.93■□□□□ 0.14
ABCF1-206ENST00000479542 NKX3-2P78367 333 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 KLRC3Q07444 240 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 SLFNL1Q499Z3 407 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 FAM83BQ5T0W9 1011 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
ABCF1-206ENST00000479542 KBTBD3Q8NAB2 608 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 KLHDC9Q8NEP7 349 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms