RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PFASO15067 1338 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 CYBAP13498 195 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 CYP2C19P33261 490 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 NPLOC4Q8TAT6 608 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 NYAP2Q9P242 653 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
SMARCE1-209ENST00000478349 PDE4BQ07343 736 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 MMP19Q99542 508 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 GDF15Q99988 308 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 SLF1Q9BQI6 1058 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 PRKAG2Q9UGJ0 569 aa17.23■□□□□ 0.35
SMARCE1-209ENST00000478349 A0A0G2JMZ2 1700 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 VWA5AO00534 786 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 SEPT4O43236 478 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 CHGBP05060 677 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 MX1P20591 662 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 RASA1P20936 1047 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 STAT3P40763 770 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 FAM83BQ5T0W9 1011 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 TEX13BQ9BXU2 312 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 NAPBQ9H115 298 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 ADAMTS5Q9UNA0 930 aa17.22■□□□□ 0.35
SMARCE1-209ENST00000478349 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 PRPF38AQ8NAV1 312 aaKnown RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 MAML3Q96JK9 1138 aa17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 LBHD1Q9BQE6 289 aaPredicted RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 UBE2OQ9C0C9 1292 aaKnown RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 SENP6Q9GZR1 1112 aaPredicted RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
SMARCE1-209ENST00000478349 TTLL1O95922 423 aa17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 TSPY3P0CV98 308 aa17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 TSPY8P0CW00 308 aa17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 SYN1P17600 705 aa17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 MAGEA10P43363 369 aaPredicted RBP17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 CNPY2Q9Y2B0 182 aa17.2■□□□□ 0.34
SMARCE1-209ENST00000478349 MYH7P12883 1935 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 F5H6K3 240 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 COBLO75128 1261 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 ZBED4O75132 1171 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 IGHA2P01877 340 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 FDX1P10109 184 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 KLRC3Q07444 240 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 AAMPQ13685 434 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 LRRC26Q2I0M4 334 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 IFNL3Q8IZI9 196 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 TDHQ8IZJ6 230 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 CLIP2Q9UDT6 1046 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 FBXO40Q9UH90 709 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 ZNF214Q9UL59 606 aaPredicted RBP17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 MYH8P13535 1937 aa17.19■□□□□ 0.34
SMARCE1-209ENST00000478349 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 M0R2C6 588 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 NDUFB10O96000 172 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 RARBP10826 455 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 SNRNP48Q6IEG0 339 aaKnown RBP17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 FEM1BQ9UK73 627 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 PCDHB15Q9Y5E8 787 aa17.18■□□□□ 0.34
SMARCE1-209ENST00000478349 BAZ2AQ9UIF9 1905 aaKnown RBP17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 OAZ1P54368 228 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 LRIT3Q3SXY7 679 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 RNF180Q86T96 592 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 TRPV1Q8NER1 839 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 MKL1Q969V6 931 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 TINF2Q9BSI4 451 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
SMARCE1-209ENST00000478349 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
SMARCE1-209ENST00000478349 PRDM1O75626 825 aa17.16■□□□□ 0.34
SMARCE1-209ENST00000478349 AKR1A1P14550 325 aa17.16■□□□□ 0.34
SMARCE1-209ENST00000478349 PPARAQ07869 468 aa17.16■□□□□ 0.34
SMARCE1-209ENST00000478349 GJC2Q5T442 439 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms