RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 NUP98P52948 1817 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 ANO9A1A5B4 782 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 DDAH1O94760 285 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 USP14P54578 494 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 ERVK-24P63145 666 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 SEC23AQ15436 765 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 E2F4Q16254 413 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 PAPD7Q5XG87 772 aaKnown RBP15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 ARL6IP4Q66PJ3 421 aaKnown RBP15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
HLA-DMA-208ENST00000477541 COL5A2P05997 1499 aaPredicted RBP15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 ERVV-1B6SEH8 477 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 IRS4O14654 1257 aaPredicted RBP15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 NDUFA10O95299 355 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 MAGEA9P43362 315 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 TSR1Q2NL82 804 aaKnown RBP15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 RETREG2Q8NC44 543 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 OR8K1Q8NGG5 319 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 TNFRSF25Q93038 417 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 DNAJC7Q99615 494 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 TRIM34Q9BYJ4 488 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 ZSWIM4Q9H7M6 989 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
HLA-DMA-208ENST00000477541 A0A087X0B3 334 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 KCNJ18B7U540 433 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 AFMP43652 599 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 PPARAQ07869 468 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 KCNJ12Q14500 433 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CHRNA2Q15822 529 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 TTC38Q5R3I4 469 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 ACRBPQ8NEB7 543 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CPLX3Q8WVH0 158 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 NUP58Q9BVL2 599 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 ARMT1Q9H993 441 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 LAMB2P55268 1798 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 A6NNZ2 444 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 PPFIA4O75335 1185 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 KRT9P35527 623 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 LONP1P36776 959 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 PPP1R2P41236 205 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 STX17P56962 302 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 ITIH3Q06033 890 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 FUT2Q10981 343 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 PKN1Q16512 942 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 TUBB8Q3ZCM7 444 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 RRAGBQ5VZM2 374 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CCDC70Q6NSX1 233 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 PDXDC2PQ6P474 469 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 AFAP1L1Q8TED9 768 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 IPO4Q8TEX9 1081 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 CDC5LQ99459 802 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 THAP9Q9H5L6 903 aa15.23■□□□□ 0.03
HLA-DMA-208ENST00000477541 XDHP47989 1333 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 UBE2Q2LH0YL09 131 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 KRT86O43790 486 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 CYLC1P35663 651 aaPredicted RBP15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 KCNB1Q14721 858 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 CCDC170Q8IYT3 715 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 SAR1BQ9Y6B6 198 aa15.22■□□□□ 0.03
HLA-DMA-208ENST00000477541 TNKSO95271 1327 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 LGALS16A8MUM7 142 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 CLSTN1O94985 981 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 CDK17Q00537 523 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 STIM1Q13586 685 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 MEA1Q16626 185 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 NELFBQ8WX92 580 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 PPM1EQ8WY54 764 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 TSGA10Q9BZW7 698 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 MAGEF1Q9HAY2 307 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 TOMM22Q9NS69 142 aa15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 LUC7L2Q9Y383 392 aaKnown RBP15.21■□□□□ 0.03
HLA-DMA-208ENST00000477541 PDS5AQ29RF7 1337 aaKnown RBP15.21■□□□□ 0.02
HLA-DMA-208ENST00000477541 FGRP09769 529 aa15.2■□□□□ 0.02
HLA-DMA-208ENST00000477541 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms