RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PTGDRQ13258 359 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 TMC6Q7Z403 805 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 FLAD1Q8NFF5 587 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 IMPACTQ9P2X3 320 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 DAGLAQ9Y4D2 1042 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 A0A087X0B3 334 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 GSDMDP57764 484 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 NT5DC1Q5TFE4 455 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 PCDHA4Q9UN74 947 aa12.57□□□□□ -0.4
HLA-DMB-260ENST00000477537 SKILP12757 684 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 MCM7P33993 719 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 MORC3Q14149 939 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 CYTH3O43739 400 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 SERPINC1P01008 464 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 MMP10P09238 476 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 SLFN14P0C7P3 912 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 SRGNP10124 158 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 NPR1P16066 1061 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCZ1BP86790 482 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCZ1P86791 482 aaPredicted RBP12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 HEATR3Q7Z4Q2 680 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 TRIML1Q8N9V2 468 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 MYRIPQ8NFW9 859 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 RASGRP4Q8TDF6 673 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 FANCLQ9NW38 375 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 DACH1Q9UI36 760 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 NRXN2Q9P2S2 1712 aa12.56□□□□□ -0.4
HLA-DMB-260ENST00000477537 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 MYO1BO43795 1136 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 AFMP43652 599 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 UBASH3AP57075 661 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 PAGE5Q96GU1 130 aa12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
HLA-DMB-260ENST00000477537 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 STXBP3O00186 592 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 PARP1P09874 1014 aaKnown RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 PICALMQ13492 652 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 IL17AQ16552 155 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 SH3RF1Q7Z6J0 888 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 DPF2Q92785 391 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CERS5Q8N5B7 392 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 MXD3Q9BW11 206 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 CPVLQ9H3G5 476 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 BARHL2Q9NY43 387 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 SUGT1Q9Y2Z0 365 aa12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
HLA-DMB-260ENST00000477537 M0R2N6 131 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 CASP1P29466 404 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 PDE6BP35913 854 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 TRMT44Q8IYL2 757 aaKnown RBP12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 SPZ1Q9BXG8 430 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 TTF2Q9UNY4 1162 aaKnown RBP12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 MYH8P13535 1937 aa12.53□□□□□ -0.4
HLA-DMB-260ENST00000477537 G3V3G9 751 aa12.52□□□□□ -0.4
HLA-DMB-260ENST00000477537 SFPQP23246 707 aaKnown RBP eCLIP12.52□□□□□ -0.4
HLA-DMB-260ENST00000477537 DPYDQ12882 1025 aa12.52□□□□□ -0.4
HLA-DMB-260ENST00000477537 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms