RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 KIAA1755Q5JYT7 1200 aa22.73■■□□□ 1.23
GMDS-204ENST00000476972 FAM227BQ96M60 508 aa22.73■■□□□ 1.23
GMDS-204ENST00000476972 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.73■■□□□ 1.23
GMDS-204ENST00000476972 SH2D4AQ9H788 454 aa22.73■■□□□ 1.23
GMDS-204ENST00000476972 MKNK2Q9HBH9 465 aa22.73■■□□□ 1.23
GMDS-204ENST00000476972 A0A0G2JMZ2 1700 aa22.73■■□□□ 1.23
GMDS-204ENST00000476972 HOXC6P09630 235 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 COG2Q14746 738 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 LRRC26Q2I0M4 334 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 RILPL2Q969X0 211 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 KANSL2Q9H9L4 492 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 HELLSQ9NRZ9 838 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 TMX2Q9Y320 296 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 IVNS1ABPQ9Y6Y0 642 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 RLFQ13129 1914 aa22.72■■□□□ 1.23
GMDS-204ENST00000476972 PARP14Q460N5 1801 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 EEF2P13639 858 aaKnown RBP22.71■■□□□ 1.23
GMDS-204ENST00000476972 GRB14Q14449 540 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 VPS53Q5VIR6 699 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 TICAM2Q86XR7 235 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 LPAR1Q92633 364 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
GMDS-204ENST00000476972 PRDM1O75626 825 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 CNGA1P29973 690 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 CYP2C19P33261 490 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 PPARAQ07869 468 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 NMIQ13287 307 aaPredicted RBP22.7■■□□□ 1.22
GMDS-204ENST00000476972 SPICE1Q8N0Z3 855 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 UBE2OQ9C0C9 1292 aaKnown RBP22.7■■□□□ 1.22
GMDS-204ENST00000476972 ZNF287Q9HBT7 754 aa22.7■■□□□ 1.22
GMDS-204ENST00000476972 LRIT3Q3SXY7 679 aa22.69■■□□□ 1.22
GMDS-204ENST00000476972 MCMDC2Q4G0Z9 681 aa22.69■■□□□ 1.22
GMDS-204ENST00000476972 TDHQ8IZJ6 230 aa22.69■■□□□ 1.22
GMDS-204ENST00000476972 SLC17A8Q8NDX2 589 aa22.69■■□□□ 1.22
GMDS-204ENST00000476972 MOV10L1Q9BXT6 1211 aaKnown RBP22.69■■□□□ 1.22
GMDS-204ENST00000476972 SENP6Q9GZR1 1112 aaPredicted RBP22.69■■□□□ 1.22
GMDS-204ENST00000476972 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
GMDS-204ENST00000476972 MYH4Q9Y623 1939 aa22.69■■□□□ 1.22
GMDS-204ENST00000476972 IGHA2P01877 340 aa22.68■■□□□ 1.22
GMDS-204ENST00000476972 PDE4AP27815 886 aa22.68■■□□□ 1.22
GMDS-204ENST00000476972 DPP9Q86TI2 863 aa22.68■■□□□ 1.22
GMDS-204ENST00000476972 ZNF589Q86UQ0 364 aaPredicted RBP22.68■■□□□ 1.22
GMDS-204ENST00000476972 TRPV1Q8NER1 839 aa22.68■■□□□ 1.22
GMDS-204ENST00000476972 PLIN4Q96Q06 1357 aa22.67■■□□□ 1.22
GMDS-204ENST00000476972 WDR46O15213 610 aaKnown RBP22.67■■□□□ 1.22
GMDS-204ENST00000476972 PDE4BQ07343 736 aa22.67■■□□□ 1.22
GMDS-204ENST00000476972 GPR153Q6NV75 609 aa22.67■■□□□ 1.22
GMDS-204ENST00000476972 SPATC1LQ9H0A9 340 aa22.67■■□□□ 1.22
GMDS-204ENST00000476972 CCDC171Q6TFL3 1326 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 IGKV6D-41A0A0C4DH26 115 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 STRNO43815 780 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 SLC3A2P08195 630 aaKnown RBP22.66■■□□□ 1.22
GMDS-204ENST00000476972 SDSP20132 328 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 ADORA2AP29274 412 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 MDM2Q00987 491 aaPredicted RBP22.66■■□□□ 1.22
GMDS-204ENST00000476972 ZNF444Q8N0Y2 327 aaPredicted RBP22.66■■□□□ 1.22
GMDS-204ENST00000476972 DEFB123Q8N688 67 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 GOPCQ9HD26 462 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 A0A0C4DFX4 3053 aa22.66■■□□□ 1.22
GMDS-204ENST00000476972 MSCO60682 206 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 ERCC3P19447 782 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 Q7L0L9 218 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 NYAP2Q9P242 653 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 COL6A3P12111 3177 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
GMDS-204ENST00000476972 RAD21O60216 631 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 COBLO75128 1261 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 FLOT1O75955 427 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 DSG3P32926 999 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 ATN1P54259 1190 aaPredicted RBP22.64■■□□□ 1.21
GMDS-204ENST00000476972 CTDSPL2Q05D32 466 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 ALX1Q15699 326 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 SHCBP1Q8NEM2 672 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 CEP95Q96GE4 821 aa22.64■■□□□ 1.21
GMDS-204ENST00000476972 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.64■■□□□ 1.21
GMDS-204ENST00000476972 COL11A1P12107 1806 aaPredicted RBP22.64■■□□□ 1.21
GMDS-204ENST00000476972 TSPY3P0CV98 308 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 TSPY8P0CW00 308 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 HSPD1P10809 573 aaKnown RBP22.63■■□□□ 1.21
GMDS-204ENST00000476972 CYBAP13498 195 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 FAM47AQ5JRC9 791 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 OLFML2BQ68BL8 750 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 MB21D1Q8N884 522 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 ANAPC4Q9UJX5 808 aa22.63■■□□□ 1.21
GMDS-204ENST00000476972 ZMYM6O95789 1325 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 LAMA4Q16363 1823 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 DNM1LO00429 736 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 PLS1Q14651 629 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 GJC2Q5T442 439 aaPredicted RBP22.62■■□□□ 1.21
GMDS-204ENST00000476972 SAMD1Q6SPF0 538 aaPredicted RBP22.62■■□□□ 1.21
GMDS-204ENST00000476972 NEDD1Q8NHV4 660 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 ATG4CQ96DT6 458 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 MROH8Q9H579 483 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 DIAPH3Q9NSV4 1193 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 MTMR4Q9NYA4 1195 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 CLIP2Q9UDT6 1046 aa22.62■■□□□ 1.21
GMDS-204ENST00000476972 TACC3Q9Y6A5 838 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms