RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MLKLQ8NB16 471 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 SPATA20Q8TB22 786 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 CRAMP1Q96RY5 1269 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 TMEM47Q9BQJ4 181 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 CCDC66A2RUB6 948 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 MCM7P33993 719 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 TRAPPC10P48553 1259 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 FMR1Q06787 632 aaKnown RBP eCLIP18.19■□□□□ 0.5
VARS2-207ENST00000476162 TRIML1Q8N9V2 468 aa18.19■□□□□ 0.5
VARS2-207ENST00000476162 CALML3P27482 149 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 AFMP43652 599 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 CDK8P49336 464 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 GNAQP50148 359 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 RHBDL3P58872 404 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 CFAP100Q494V2 611 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 BLIDQ8IZY5 108 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 CCDC150Q8NCX0 1101 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 CBFA2T2O43439 604 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 CYTH3O43739 400 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 HSP90AA4PQ58FG1 418 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 TYW1BQ6NUM6 668 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 PAXIP1Q6ZW49 1069 aaPredicted RBP18.18■□□□□ 0.5
VARS2-207ENST00000476162 KRT27Q7Z3Y8 459 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 PROM2Q8N271 834 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 PAGE5Q96GU1 130 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 SH3GLB2Q9NR46 395 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 DACH1Q9UI36 760 aa18.18■□□□□ 0.5
VARS2-207ENST00000476162 FLT1P17948 1338 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 KLRG2A4D1S0 409 aaPredicted RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 MYO1BO43795 1136 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 PLCG2P16885 1265 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
VARS2-207ENST00000476162 SYCP1Q15431 976 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 FAM163AQ96GL9 167 aaPredicted RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 CCDC34Q96HJ3 373 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 EYA3Q99504 573 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 TRMT1Q9NXH9 659 aaKnown RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 DDX41Q9UJV9 622 aaKnown RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 PCDHA4Q9UN74 947 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 CASP1P29466 404 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 TRMT44Q8IYL2 757 aaKnown RBP18.17■□□□□ 0.5
VARS2-207ENST00000476162 RASGRP4Q8TDF6 673 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 TBC1D22AQ8WUA7 517 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 NFE2L3Q9Y4A8 694 aa18.17■□□□□ 0.5
VARS2-207ENST00000476162 PALM3A6NDB9 673 aaPredicted RBP18.16■□□□□ 0.5
VARS2-207ENST00000476162 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
VARS2-207ENST00000476162 GTF2IP78347 998 aa18.16■□□□□ 0.5
VARS2-207ENST00000476162 IL17AQ16552 155 aa18.16■□□□□ 0.5
VARS2-207ENST00000476162 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
VARS2-207ENST00000476162 ENOX1Q8TC92 643 aaKnown RBP18.16■□□□□ 0.5
VARS2-207ENST00000476162 MED15Q96RN5 788 aa18.16■□□□□ 0.5
VARS2-207ENST00000476162 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
VARS2-207ENST00000476162 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 TERF2Q15554 542 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 PTPN21Q16825 1174 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 WWC2Q6AWC2 1192 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 RASGRP2Q7LDG7 609 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 SLF2Q8IX21 1173 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 CCAR2Q8N163 923 aaKnown RBP18.15■□□□□ 0.5
VARS2-207ENST00000476162 GAKO14976 1311 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 TULP2O00295 520 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 SP8Q8IXZ3 490 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 SNED1Q8TER0 1413 aa18.15■□□□□ 0.5
VARS2-207ENST00000476162 ZNF18P17022 549 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 DPYDQ12882 1025 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 VSTM4Q8IW00 320 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 NEDD1Q8NHV4 660 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 INTS13Q9NVM9 706 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 KLRF2D3W0D1 207 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 M0R2N6 131 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 DHX8Q14562 1220 aaKnown RBP18.14■□□□□ 0.49
VARS2-207ENST00000476162 PTPN14Q15678 1187 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 NYAP1Q6ZVC0 841 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 C4orf32Q8N8J7 132 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 STAMQ92783 540 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 KCND1Q9NSA2 647 aa18.14■□□□□ 0.49
VARS2-207ENST00000476162 E2F4Q16254 413 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 E4F1Q66K89 784 aaPredicted RBP18.13■□□□□ 0.49
VARS2-207ENST00000476162 ZNF592Q92610 1267 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 SAMSN1Q9NSI8 373 aaKnown RBP18.13■□□□□ 0.49
VARS2-207ENST00000476162 BARHL2Q9NY43 387 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 PCDHA6Q9UN73 950 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 DAGLAQ9Y4D2 1042 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 PCDHA8Q9Y5H6 950 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 CDK5RAP2Q96SN8 1893 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 CCDC194A0A1B0GVG4 234 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 STXBP3O00186 592 aa18.13■□□□□ 0.49
VARS2-207ENST00000476162 ERCC5P28715 1186 aaPredicted RBP18.13■□□□□ 0.49
VARS2-207ENST00000476162 TMC4Q7Z404 712 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms