RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 GTPBP6O43824 516 aaPredicted RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 FGBP02675 491 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 POU3F3P20264 500 aaPredicted RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 CYP2C18P33260 490 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 SHCBP1Q8NEM2 672 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 HLA-CQ95604 372 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
ATG9A-220ENST00000475339 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 FLT1P17948 1338 aa17.2■□□□□ 0.34
ATG9A-220ENST00000475339 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 CDK7P50613 346 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 KCNA10Q16322 511 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 CERS4Q9HA82 394 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
ATG9A-220ENST00000475339 MROH7Q68CQ1 1323 aa17.19■□□□□ 0.34
ATG9A-220ENST00000475339 WDFY4Q6ZS81 3184 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
ATG9A-220ENST00000475339 AKR1A1P14550 325 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 PLS1Q14651 629 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 COG2Q14746 738 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 SPATA5Q8NB90 893 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
ATG9A-220ENST00000475339 MROH8Q9H579 483 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
ATG9A-220ENST00000475339 MYADML2A6NDP7 307 aa17.17■□□□□ 0.34
ATG9A-220ENST00000475339 CCSAPQ6IQ19 270 aaPredicted RBP17.17■□□□□ 0.34
ATG9A-220ENST00000475339 GLT1D1Q96MS3 346 aa17.17■□□□□ 0.34
ATG9A-220ENST00000475339 TINF2Q9BSI4 451 aa17.17■□□□□ 0.34
ATG9A-220ENST00000475339 PCDHA11Q9Y5I1 949 aa17.17■□□□□ 0.34
ATG9A-220ENST00000475339 TRANK1O15050 2925 aa17.17■□□□□ 0.34
ATG9A-220ENST00000475339 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 A0A1B0GUL7 405 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 EPOPA6NHQ4 379 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 BAG3O95817 575 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 PGK2P07205 417 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 FCER1AP12319 257 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
ATG9A-220ENST00000475339 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
ATG9A-220ENST00000475339 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 LRP2BPQ9P2M1 347 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 SLC4A7Q9Y6M7 1214 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 ELP1O95163 1332 aa17.16■□□□□ 0.34
ATG9A-220ENST00000475339 GNAI3P08754 354 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 PLCG2P16885 1265 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 MEIS3Q99687 375 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
ATG9A-220ENST00000475339 ARVCFO00192 962 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 PPP4CP60510 307 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 GJD3Q8N144 294 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
ATG9A-220ENST00000475339 ZDBF2Q9HCK1 2354 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 CA3P07451 260 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 ABCB5Q2M3G0 1257 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
ATG9A-220ENST00000475339 ITPRIPQ8IWB1 547 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
ATG9A-220ENST00000475339 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
ATG9A-220ENST00000475339 TLR3O15455 904 aaKnown RBP17.12■□□□□ 0.33
ATG9A-220ENST00000475339 ASGR1P07306 291 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 MS4A1P11836 297 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 ATP2A2P16615 1042 aaKnown RBP17.12■□□□□ 0.33
ATG9A-220ENST00000475339 CCL23P55773 120 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 ZNF792Q3KQV3 632 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
ATG9A-220ENST00000475339 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 MMP19Q99542 508 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
ATG9A-220ENST00000475339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
ATG9A-220ENST00000475339 ZNFX1Q9P2E3 1918 aaKnown RBP17.11■□□□□ 0.33
ATG9A-220ENST00000475339 ZBBXA8MT70 800 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 CD4P01730 458 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
ATG9A-220ENST00000475339 TFCP2Q12800 502 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 ARNTL2Q8WYA1 636 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
ATG9A-220ENST00000475339 PHOX2BQ99453 314 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms