RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CCDC148Q8NFR7 591 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 SHISA4Q96DD7 197 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 TMEM39BQ9GZU3 492 aa22.78■■□□□ 1.24
SSR1-204ENST00000474597 CNOT7Q9UIV1 285 aaKnown RBP22.78■■□□□ 1.24
SSR1-204ENST00000474597 SNHG28P0DPA3 235 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 EEF2P13639 858 aaKnown RBP22.77■■□□□ 1.24
SSR1-204ENST00000474597 LIG1P18858 919 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 LMNB1P20700 586 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 TNFAIP1Q13829 316 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 CCDC96Q2M329 555 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 JMYQ8N9B5 988 aa22.77■■□□□ 1.24
SSR1-204ENST00000474597 GPKOWQ92917 476 aaPredicted RBP eCLIP22.77■■□□□ 1.242e-15■□□□□ 9.4
SSR1-204ENST00000474597 RAD21O60216 631 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 SLC39A14Q15043 492 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 LRSAM1Q6UWE0 723 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 HEATR3Q7Z4Q2 680 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
SSR1-204ENST00000474597 MKL1Q969V6 931 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 CPVLQ9H3G5 476 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 VAT1LQ9HCJ6 419 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 GPCPD1Q9NPB8 672 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 PCDHA7Q9UN72 937 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 ZNF541Q9H0D2 1346 aa22.76■■□□□ 1.23
SSR1-204ENST00000474597 GH2P01242 217 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 SHROOM1Q2M3G4 852 aaPredicted RBP22.75■■□□□ 1.23
SSR1-204ENST00000474597 SLC35G1Q2M3R5 365 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 GPATCH4Q5T3I0 446 aaKnown RBP22.75■■□□□ 1.23
SSR1-204ENST00000474597 CCDC73Q6ZRK6 1079 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 HOMER1Q86YM7 354 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 UBA5Q9GZZ9 404 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 DDX19AQ9NUU7 478 aaKnown RBP22.75■■□□□ 1.23
SSR1-204ENST00000474597 ZNF543Q08ER8 600 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 ADALQ6DHV7 355 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 GAS2L3Q86XJ1 694 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 CCDC12Q8WUD4 166 aaPredicted RBP22.75■■□□□ 1.23
SSR1-204ENST00000474597 BARHL2Q9NY43 387 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 DACT1Q9NYF0 836 aa22.75■■□□□ 1.23
SSR1-204ENST00000474597 NOL7Q9UMY1 257 aaKnown RBP22.75■■□□□ 1.23
SSR1-204ENST00000474597 H7C1D1 291 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 TBC1D12O60347 775 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 VEGFAP15692 232 aaPredicted RBP22.74■■□□□ 1.23
SSR1-204ENST00000474597 KIF4BQ2VIQ3 1234 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 TBC1D10BQ4KMP7 808 aaPredicted RBP22.74■■□□□ 1.23
SSR1-204ENST00000474597 WWC2Q6AWC2 1192 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 SAMD7Q7Z3H4 446 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 FAM177A1Q8N128 213 aaPredicted RBP22.74■■□□□ 1.23
SSR1-204ENST00000474597 RIOX1Q9H6W3 641 aa22.74■■□□□ 1.23
SSR1-204ENST00000474597 NUP62CLQ9H1M0 184 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 CEP131Q9UPN4 1083 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 SBF1O95248 1867 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 PPP6R2O75170 966 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 EGFRP00533 1210 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 MARCKSP29966 332 aaPredicted RBP22.73■■□□□ 1.23
SSR1-204ENST00000474597 MRE11P49959 708 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 GALNT17Q6IS24 598 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 BLIDQ8IZY5 108 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 FSIP1Q8NA03 581 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 DCAF4Q8WV16 495 aa22.73■■□□□ 1.23
SSR1-204ENST00000474597 A0A1W2PQ27 194 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 A0A1W2PQ64 194 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 A0A1W2PQD8 194 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 STXBP3O00186 592 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 NR1I2O75469 434 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 ATP2B1P20020 1258 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 SLC1A4P43007 532 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 TOB1P50616 345 aaPredicted RBP22.72■■□□□ 1.23
SSR1-204ENST00000474597 NAPAP54920 295 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 RASA3Q14644 834 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 NPY5RQ15761 445 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 SLFN13Q68D06 897 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 MRPS27Q92552 414 aaKnown RBP22.72■■□□□ 1.23
SSR1-204ENST00000474597 PIGSQ96S52 555 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 GRPEL1Q9HAV7 217 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 PCDHA4Q9UN74 947 aa22.72■■□□□ 1.23
SSR1-204ENST00000474597 RRP1BQ14684 758 aaKnown RBP22.71■■□□□ 1.23
SSR1-204ENST00000474597 PTPAQ15257 358 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 ARHGEF10LQ9HCE6 1279 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 hCG_1984214I3L0E3 225 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 KCTD1Q719H9 257 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 ZNF713Q8N859 430 aaPredicted RBP22.71■■□□□ 1.23
SSR1-204ENST00000474597 TNMDQ9H2S6 317 aa22.71■■□□□ 1.23
SSR1-204ENST00000474597 TRIM75PA6NK02 468 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 GPC2Q8N158 579 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 GMCL1P1Q8NEA9 526 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 TNFRSF25Q93038 417 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 HACL1Q9UJ83 578 aa22.7■■□□□ 1.22
SSR1-204ENST00000474597 FAM160A1Q05DH4 1040 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 TTBK2Q6IQ55 1244 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 SIAH1Q8IUQ4 282 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 ADGRF4Q8IZF3 695 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 TSPY26PQ9H489 355 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 GOLPH3LQ9H4A5 285 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.69■■□□□ 1.22
SSR1-204ENST00000474597 ZBTB21Q9ULJ3 1066 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 SYNPO2Q9UMS6 1093 aa22.69■■□□□ 1.22
SSR1-204ENST00000474597 SCAF8Q9UPN6 1271 aaKnown RBP22.69■■□□□ 1.22
SSR1-204ENST00000474597 PCDHB6Q9Y5E3 794 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms