RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 RAD50Q92878 1312 aa21.32■■□□□ 1
EFNA1-204ENST00000474413 MAPK4P31152 587 aa21.32■■□□□ 1
EFNA1-204ENST00000474413 GMCL1P1Q8NEA9 526 aa21.32■■□□□ 1
EFNA1-204ENST00000474413 MOV10L1Q9BXT6 1211 aaKnown RBP21.32■■□□□ 1
EFNA1-204ENST00000474413 SYNPO2Q9UMS6 1093 aa21.32■■□□□ 1
EFNA1-204ENST00000474413 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
EFNA1-204ENST00000474413 TRIM32Q13049 653 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 TMEM132BQ14DG7 1078 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 TRIB2Q92519 343 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 SHISA4Q96DD7 197 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 PPP1R9AQ9ULJ8 1098 aa21.31■■□□□ 1
EFNA1-204ENST00000474413 TSPY2A6NKD2 308 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 INHAP05111 366 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 AKNAD1Q5T1N1 836 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 SPATC1LQ9H0A9 340 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 HOXC10Q9NYD6 342 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 ZNF214Q9UL59 606 aaPredicted RBP21.3■■□□□ 1
EFNA1-204ENST00000474413 TAF6LQ9Y6J9 622 aa21.3■■□□□ 1
EFNA1-204ENST00000474413 VWA5AO00534 786 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 SGSM2O43147 1006 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 RAD21O60216 631 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 RANBP6O60518 1105 aaKnown RBP21.29■■□□□ 1
EFNA1-204ENST00000474413 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
EFNA1-204ENST00000474413 PTH1RQ03431 593 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 RCSD1Q6JBY9 416 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 NBPF11Q86T75 865 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 UNC93B1Q9H1C4 597 aa21.29■■□□□ 1
EFNA1-204ENST00000474413 CCL5P13501 91 aa21.28■■□□□ 1
EFNA1-204ENST00000474413 GRB14Q14449 540 aa21.28■■□□□ 1
EFNA1-204ENST00000474413 CCL14Q16627 93 aa21.28■■□□□ 1
EFNA1-204ENST00000474413 RRP12Q5JTH9 1297 aaKnown RBP21.28■■□□□ 1
EFNA1-204ENST00000474413 SAMD1Q6SPF0 538 aaPredicted RBP21.28■■□□□ 1
EFNA1-204ENST00000474413 MB21D1Q8N884 522 aa21.28■■□□□ 1
EFNA1-204ENST00000474413 SOCS4Q8WXH5 440 aa21.28■■□□□ 1
EFNA1-204ENST00000474413 IGHA2P01877 340 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 ERCC3P19447 782 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 CYP2B6P20813 491 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 SLFN13Q68D06 897 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 GMCL1Q96IK5 515 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 SLF1Q9BQI6 1058 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 STX8Q9UNK0 236 aa21.27■■□□□ 1
EFNA1-204ENST00000474413 PTPREP23469 700 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 CCNA1P78396 465 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 MLLT1Q03111 559 aaPredicted RBP21.26■□□□□ 0.99
EFNA1-204ENST00000474413 SHCBP1Q8NEM2 672 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 APBA2Q99767 749 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 NUDT12Q9BQG2 462 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 TOMM22Q9NS69 142 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 FLRT1Q9NZU1 646 aa21.26■□□□□ 0.99
EFNA1-204ENST00000474413 SLC15A5A6NIM6 579 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 ZNF213O14771 459 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 HMGCRP04035 888 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 PCP11498 1178 aaKnown RBP21.25■□□□□ 0.99
EFNA1-204ENST00000474413 XRCC5P13010 732 aaKnown RBP21.25■□□□□ 0.99
EFNA1-204ENST00000474413 MAP2K5Q13163 448 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 MAP3K21Q5TCX8 1036 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 MFSD6Q6ZSS7 791 aa21.25■□□□□ 0.99
EFNA1-204ENST00000474413 BMP3P12645 472 aa21.24■□□□□ 0.99
EFNA1-204ENST00000474413 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
EFNA1-204ENST00000474413 NPLOC4Q8TAT6 608 aa21.24■□□□□ 0.99
EFNA1-204ENST00000474413 TMEM47Q9BQJ4 181 aa21.24■□□□□ 0.99
EFNA1-204ENST00000474413 PAK6Q9NQU5 681 aaPredicted RBP21.24■□□□□ 0.99
EFNA1-204ENST00000474413 FRMPD3Q5JV73 1810 aa21.24■□□□□ 0.99
EFNA1-204ENST00000474413 KDM4AO75164 1064 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 HOXC6P09630 235 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 MCCP23508 829 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 RGS2P41220 211 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 PLS1Q14651 629 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 WDR78Q5VTH9 848 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 ZKSCAN3Q9BRR0 538 aa21.23■□□□□ 0.99
EFNA1-204ENST00000474413 RNF41Q9H4P4 317 aaPredicted RBP21.23■□□□□ 0.99
EFNA1-204ENST00000474413 BIN2Q9UBW5 565 aaPredicted RBP21.23■□□□□ 0.99
EFNA1-204ENST00000474413 B4E1Z4 1266 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 COBLO75128 1261 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 GJB1P08034 283 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 CYP21A2P08686 494 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 ADORA2AP29274 412 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 UBXN2AP68543 259 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
EFNA1-204ENST00000474413 STOX1Q6ZVD7 989 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 KCTD1Q719H9 257 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 RIOX2Q8IUF8 465 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 PRPF38AQ8NAV1 312 aaKnown RBP21.22■□□□□ 0.99
EFNA1-204ENST00000474413 KIFC2Q96AC6 838 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 FEM1BQ9UK73 627 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 RIPK3Q9Y572 518 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
EFNA1-204ENST00000474413 TMEM232C9JQI7 657 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 TOP1P11387 765 aaKnown RBP21.21■□□□□ 0.99
EFNA1-204ENST00000474413 SLC1A4P43007 532 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 GJA8P48165 433 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 COL9A3Q14050 684 aaPredicted RBP21.21■□□□□ 0.99
EFNA1-204ENST00000474413 UBE2Q1Q7Z7E8 422 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms