RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 IGHA2P01877 340 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 GNAT2P19087 354 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 CYP2C19P33261 490 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 BMP8BP34820 402 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 OLFML2BQ68BL8 750 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 GDF15Q99988 308 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 GPAA1O43292 621 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 RAD21O60216 631 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 COBLO75128 1261 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 FCER1AP12319 257 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 CYBAP13498 195 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 SYN1P17600 705 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 RASA1P20936 1047 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 TMEM132BQ14DG7 1078 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
SEMA4D-216ENST00000474258 PATL2C9JE40 543 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 APPP05067 770 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 TDO2P48775 406 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 LRRC26Q2I0M4 334 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 TRPV1Q8NER1 839 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 SENP6Q9GZR1 1112 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
SEMA4D-216ENST00000474258 ROBO3Q96MS0 1386 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 DNM1LO00429 736 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 VWA5AO00534 786 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 STAT3P40763 770 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 AAMPQ13685 434 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 MMP19Q99542 508 aa13.21□□□□□ -0.29
SEMA4D-216ENST00000474258 MCM3APO60318 1980 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 F5H6K3 240 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 M0R2C6 588 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 SEPT4O43236 478 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 COPB2P35606 906 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 MAGEA10P43363 369 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 KLRC3Q07444 240 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-216ENST00000474258 KCTD2Q14681 263 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 MKL1Q969V6 931 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 FSD1Q9BTV5 496 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 ZNF214Q9UL59 606 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
SEMA4D-216ENST00000474258 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 SOX1O00570 391 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 PRDM1O75626 825 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 NDUFB10O96000 172 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 MX1P20591 662 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 PDE4BQ07343 736 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 GJC2Q5T442 439 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 UBE2OQ9C0C9 1292 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
SEMA4D-216ENST00000474258 ZBED4O75132 1171 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 TTLL1O95922 423 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 PGK2P07205 417 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 NAPBQ9H115 298 aa13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-216ENST00000474258 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms