RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.09■□□□□ 0.17
COPS7B-219ENST00000474042 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
COPS7B-219ENST00000474042 FBXO28Q9NVF7 368 aa16.09■□□□□ 0.17
COPS7B-219ENST00000474042 SLC5A4Q9NY91 659 aa16.09■□□□□ 0.17
COPS7B-219ENST00000474042 DNAH12Q6ZR08 3092 aa16.09■□□□□ 0.17
COPS7B-219ENST00000474042 SLC25A27O95847 323 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 RTP1P59025 263 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
COPS7B-219ENST00000474042 SNX17Q15036 470 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 SBK1Q52WX2 424 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 RIOX2Q8IUF8 465 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 REPS2Q8NFH8 660 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 GOPCQ9HD26 462 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
COPS7B-219ENST00000474042 PPP1R9AQ9ULJ8 1098 aa16.08■□□□□ 0.16
COPS7B-219ENST00000474042 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 FCER1AP12319 257 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
COPS7B-219ENST00000474042 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
COPS7B-219ENST00000474042 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 ARRDC4Q8NCT1 418 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
COPS7B-219ENST00000474042 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
COPS7B-219ENST00000474042 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 VWA5AO00534 786 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 RASA1P20936 1047 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 Q7L0L9 218 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 APPBP2Q92624 585 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 MMP19Q99542 508 aa16.06■□□□□ 0.16
COPS7B-219ENST00000474042 COPB2P35606 906 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 LRRC41Q15345 812 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 PRAMEF19Q5SWL8 479 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 FAM83BQ5T0W9 1011 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
COPS7B-219ENST00000474042 SLC39A5Q6ZMH5 540 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 OSBP2Q969R2 916 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
COPS7B-219ENST00000474042 MTMR10Q9NXD2 777 aa16.05■□□□□ 0.16
COPS7B-219ENST00000474042 DIS3Q9Y2L1 958 aaKnown RBP16.05■□□□□ 0.16
COPS7B-219ENST00000474042 IGKV6D-41A0A0C4DH26 115 aa16.04■□□□□ 0.16
COPS7B-219ENST00000474042 ZNF792Q3KQV3 632 aa16.04■□□□□ 0.16
COPS7B-219ENST00000474042 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
COPS7B-219ENST00000474042 NYAP2Q9P242 653 aa16.04■□□□□ 0.16
COPS7B-219ENST00000474042 ATP11BQ9Y2G3 1177 aa16.04■□□□□ 0.16
COPS7B-219ENST00000474042 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
COPS7B-219ENST00000474042 PLIN4Q96Q06 1357 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 PGK2P07205 417 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 STAT3P40763 770 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 C1orf53Q5VUE5 145 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 TSHZ3Q63HK5 1081 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
COPS7B-219ENST00000474042 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 PDLIM7Q9NR12 457 aa16.03■□□□□ 0.16
COPS7B-219ENST00000474042 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
COPS7B-219ENST00000474042 GPAA1O43292 621 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 NDUFB10O96000 172 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.16
COPS7B-219ENST00000474042 KCTD2Q14681 263 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 TRIM60Q495X7 471 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 TEX13BQ9BXU2 312 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 PRKAG2Q9UGJ0 569 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 PHF24Q9UPV7 400 aa16.02■□□□□ 0.16
COPS7B-219ENST00000474042 MCM3APO60318 1980 aa16.02■□□□□ 0.15
COPS7B-219ENST00000474042 F5H6K3 240 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 M0R2C6 588 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-219ENST00000474042 RARBP10826 455 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-219ENST00000474042 GNAT2P19087 354 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 ADCYAP1R1P41586 468 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 KLRC3Q07444 240 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-219ENST00000474042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
COPS7B-219ENST00000474042 MKNK2Q9HBH9 465 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 XPNPEP3Q9NQH7 507 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 LRRC37A2A6NM11 1700 aa16.01■□□□□ 0.15
COPS7B-219ENST00000474042 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 DNAJC25-GNG10A0A024R161 153 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 MINDY4BA8MYZ0 360 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 POTEB2H3BUK9 544 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 ATP2A1O14983 1001 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 RAD21O60216 631 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 SNRNP48Q6IEG0 339 aaKnown RBP16■□□□□ 0.15
COPS7B-219ENST00000474042 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
COPS7B-219ENST00000474042 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
COPS7B-219ENST00000474042 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
COPS7B-219ENST00000474042 ADAMTS4O75173 837 aa15.99■□□□□ 0.15
COPS7B-219ENST00000474042 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
COPS7B-219ENST00000474042 AKR1A1P14550 325 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms