RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBXN11-213ENST00000472155 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 KIF5BP33176 963 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 GSTO1P78417 241 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 NEMFO60524 1076 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 ZNF18P17022 549 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 GSDMDP57764 484 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 CERS5Q8N5B7 392 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 EYA3Q99504 573 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 PLIN2Q99541 437 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
UBXN11-213ENST00000472155 E2F4Q16254 413 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 INF2Q27J81 1249 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 VSTM4Q8IW00 320 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
UBXN11-213ENST00000472155 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
UBXN11-213ENST00000472155 DOK7Q18PE1 504 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 ELOA2Q8IYF1 753 aaPredicted RBP17.11■□□□□ 0.33
UBXN11-213ENST00000472155 ANKS1AQ92625 1134 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 M0R2N6 131 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 CUL4BQ13620 913 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 UBA5Q9GZZ9 404 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 DDX4Q9NQI0 724 aaKnown RBP17.11■□□□□ 0.33
UBXN11-213ENST00000472155 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
UBXN11-213ENST00000472155 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-213ENST00000472155 STXBP3O00186 592 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 LDHCP07864 332 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 SCNN1DP51172 638 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 LRRC15Q8TF66 581 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
UBXN11-213ENST00000472155 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 TEX33O43247 280 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 BBOX1O75936 387 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-213ENST00000472155 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
UBXN11-213ENST00000472155 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 PPP1R13BQ96KQ4 1090 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
UBXN11-213ENST00000472155 MYH1P12882 1939 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 MAPK8IP1Q9UQF2 711 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 PDXDC2PQ6P474 469 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
UBXN11-213ENST00000472155 ENOX1Q8TC92 643 aaKnown RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-213ENST00000472155 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.33
UBXN11-213ENST00000472155 TOP1P11387 765 aaKnown RBP17.08■□□□□ 0.33
UBXN11-213ENST00000472155 MSL1Q68DK7 614 aa17.08■□□□□ 0.33
UBXN11-213ENST00000472155 AMOTL1Q8IY63 956 aa17.08■□□□□ 0.33
UBXN11-213ENST00000472155 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.33
UBXN11-213ENST00000472155 ANKRD31Q8N7Z5 1873 aa17.08■□□□□ 0.33
UBXN11-213ENST00000472155 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.32
UBXN11-213ENST00000472155 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
UBXN11-213ENST00000472155 TMEM139Q8IV31 216 aa17.08■□□□□ 0.32
UBXN11-213ENST00000472155 ZBTB22O15209 634 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 FANCGO15287 622 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 CTIFO43310 598 aaKnown RBP17.07■□□□□ 0.32
UBXN11-213ENST00000472155 SHROOM1Q2M3G4 852 aaPredicted RBP17.07■□□□□ 0.32
UBXN11-213ENST00000472155 KANK3Q6NY19 840 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
UBXN11-213ENST00000472155 PDCL3Q9H2J4 239 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 GAKO14976 1311 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 NEDD1Q8NHV4 660 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 PIGSQ96S52 555 aa17.07■□□□□ 0.32
UBXN11-213ENST00000472155 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
UBXN11-213ENST00000472155 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 LRRN4CLQ8ND94 238 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
UBXN11-213ENST00000472155 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 CBFA2T2O43439 604 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 AKR1B1P15121 316 aa17.06■□□□□ 0.32
UBXN11-213ENST00000472155 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms