RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 PANK3Q9H999 370 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 STOML1Q9UBI4 398 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 AP4E1Q9UPM8 1137 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 ANKRD36BQ8N2N9 1353 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 OVOS2A0A0J9YW53 1432 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 OVOS2Q6IE36 1432 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 HMX2A2RU54 273 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 EXOC5O00471 708 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 MEI1Q5TIA1 1274 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 RASIP1Q5U651 963 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 NBPF6Q5VWK0 638 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 GRIN3AQ8TCU5 1115 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 NBPF4Q96M43 638 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 THRAP3Q9Y2W1 955 aaKnown RBP9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 ACTL7BQ9Y614 415 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 NSD3Q9BZ95 1437 aa9.19□□□□□ -0.94
PTP4A1-202ENST00000470661 FSTP19883 344 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 MAP4P27816 1152 aaKnown RBP9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 USP11P51784 963 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 BEND4Q6ZU67 534 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 TRIM42Q8IWZ5 723 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
PTP4A1-202ENST00000470661 LTN1O94822 1766 aa9.17□□□□□ -0.94
PTP4A1-202ENST00000470661 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
PTP4A1-202ENST00000470661 FBLIM1Q8WUP2 373 aa9.17□□□□□ -0.94
PTP4A1-202ENST00000470661 PDGFDQ9GZP0 370 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-202ENST00000470661 CTSHP09668 335 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 IL2RBP14784 551 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 RAB6AP20340 208 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 BMP6P22004 513 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 ZNF252P-AS1Q0IIN9 211 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 MRS2Q9HD23 443 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 FAM105AQ9NUU6 356 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 VTI1BQ9UEU0 232 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
PTP4A1-202ENST00000470661 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 KIF4BQ2VIQ3 1234 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 CLEC10AQ8IUN9 316 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 GPBAR1Q8TDU6 330 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 FAM83CQ9BQN1 747 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 KRT82Q9NSB4 513 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 SAMM50Q9Y512 469 aa9.15□□□□□ -0.94
PTP4A1-202ENST00000470661 MYOM1P52179 1685 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 LRRC37A3O60309 1634 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 TMPRSS2O15393 492 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 SORBS3O60504 671 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 LLGL2Q6P1M3 1020 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 SV2BQ7L1I2 683 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 POLKQ9UBT6 870 aa9.14□□□□□ -0.95
PTP4A1-202ENST00000470661 KIF7Q2M1P5 1343 aa9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 ASPAP45381 313 aa9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 ID3Q02535 119 aa9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 PCDHGC5Q9Y5F6 944 aa9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 PEAK1Q9H792 1746 aa9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 TNS1Q9HBL0 1735 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 PARP4Q9UKK3 1724 aaKnown RBP9.13□□□□□ -0.95
PTP4A1-202ENST00000470661 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 IGLV1-40P01703 118 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 NFIAQ12857 509 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 NFKBIBQ15653 356 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 ZCRB1Q8TBF4 217 aaKnown RBP9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 CRIM1Q9NZV1 1036 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 OVOS2A0A0G2JMS6 1433 aa9.12□□□□□ -0.95
PTP4A1-202ENST00000470661 MEGF6O75095 1541 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 USP54Q70EL1 1684 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 NFICP08651 508 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 TAF1CQ15572 869 aaPredicted RBP9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 RNF43Q68DV7 783 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 CRELD1Q96HD1 420 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 FANCD2OSQ96PS1 177 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 LGR6Q9HBX8 967 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 RGPD1P0DJD0 1748 aa9.11□□□□□ -0.95
PTP4A1-202ENST00000470661 SBF2Q86WG5 1849 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 HNRNPUQ00839 825 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 EIF4A2Q14240 407 aaKnown RBP9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 LRRC14Q15048 493 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms