RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 ESR2Q92731 530 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 TCEANC2Q96MN5 208 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 TTC14Q96N46 770 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 ZSCAN10Q96SZ4 725 aaPredicted RBP10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 TRIM34Q9BYJ4 488 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 KRT23Q9C075 422 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 FAM217BQ9NTX9 383 aaPredicted RBP10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
TGFBR3-206ENST00000470600 PLXNA1Q9UIW2 1896 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ALDH1A1P00352 501 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 TOP1P11387 765 aaKnown RBP10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 TAL1P17542 331 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 LBX1P52954 281 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 EVCP57679 992 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ZNF543Q08ER8 600 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 FUT2Q10981 343 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 TOB2Q14106 344 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 FAM110CQ1W6H9 321 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 TTBK2Q6IQ55 1244 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 SGMS1Q86VZ5 419 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 USP6NLQ92738 828 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ATG4CQ96DT6 458 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 MTMR8Q96EF0 704 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 LRRC2Q9BYS8 371 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 PORCNQ9H237 461 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ZNF287Q9HBT7 754 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 CPA4Q9UI42 421 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
TGFBR3-206ENST00000470600 MYH6P13533 1939 aa10.21□□□□□ -0.78
TGFBR3-206ENST00000470600 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PALM3A6NDB9 673 aaPredicted RBP10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PRC1O43663 620 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 CYTH3O43739 400 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 ST3GAL1Q11201 340 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 FRMPD3Q5JV73 1810 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 NCOA7Q8NI08 942 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 SHISA4Q96DD7 197 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 FGD4Q96M96 766 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PARK7Q99497 189 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 TM6SF1Q9BZW5 370 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PRDM10Q9NQV6 1147 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 BRPF3Q9ULD4 1205 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 STX8Q9UNK0 236 aa10.2□□□□□ -0.78
TGFBR3-206ENST00000470600 PPP1R11O60927 126 aaPredicted RBP10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 REC8O95072 547 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 RPS6KB1P23443 525 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 MCCP23508 829 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 LIFRP42702 1097 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 CTCFP49711 727 aaPredicted RBP10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 LACTBP83111 547 aaPredicted RBP10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 GRM4Q14833 912 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 KCTD1Q719H9 257 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 NEK1Q96PY6 1258 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 FEZ1Q99689 392 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 BACH2Q9BYV9 841 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 SLC38A10Q9HBR0 1119 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 GJD2Q9UKL4 321 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 RIPK3Q9Y572 518 aa10.19□□□□□ -0.78
TGFBR3-206ENST00000470600 ASTN1O14525 1302 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 MCM3APO60318 1980 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 VWA5AO00534 786 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 OPLAHO14841 1288 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 ATP2A1O14983 1001 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 BMP3P12645 472 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 ERVK-9P63128 1117 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 ERVK-24P63145 666 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 COL13A1Q5TAT6 717 aaPredicted RBP10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 DHX32Q7L7V1 743 aaKnown RBP10.18□□□□□ -0.78
TGFBR3-206ENST00000470600 ANKRD13CQ8N6S4 541 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms