RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 HMGCRP04035 888 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 MAPK4P31152 587 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 NUCB1Q02818 461 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 RILPL2Q969X0 211 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 GPATCH3Q96I76 525 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 SLC15A5A6NIM6 579 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 ADORA2AP29274 412 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 PPARAQ07869 468 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 GRB14Q14449 540 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 HABP4Q5JVS0 413 aaKnown RBP11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 TTBK2Q6IQ55 1244 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 CHD1LQ86WJ1 897 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 NCAPG2Q86XI2 1143 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 GCC1Q96CN9 775 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 RPTORQ8N122 1335 aa11.01□□□□□ -0.65
SHROOM3-203ENST00000469923 MYH7P12883 1935 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 VWA5AO00534 786 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 ERC2O15083 957 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 XRCC5P13010 732 aaKnown RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 ZKSCAN1P17029 563 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 SYN1P17600 705 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 MCCP23508 829 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 RGS2P41220 211 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 TMEM63BQ5T3F8 832 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 GIMAP6Q6P9H5 292 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 NEDD1Q8NHV4 660 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 MKL1Q969V6 931 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 EVI5LQ96CN4 794 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 RWDD1Q9H446 243 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 RAVER2Q9HCJ3 691 aaKnown RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 NYAP2Q9P242 653 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 ARPP21Q9UBL0 812 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 ZNF214Q9UL59 606 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
SHROOM3-203ENST00000469923 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 PFASO15067 1338 aa11□□□□□ -0.65
SHROOM3-203ENST00000469923 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 SDSP20132 328 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 ZNF444Q8N0Y2 327 aaPredicted RBP10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 CPXCR1Q8N123 301 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 FGD4Q96M96 766 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 NAPBQ9H115 298 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 CPVLQ9H3G5 476 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 OGDHLQ9ULD0 1010 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 SMCHD1A6NHR9 2005 aa10.99□□□□□ -0.65
SHROOM3-203ENST00000469923 WDR46O15213 610 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 GSPT1P15170 499 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 CNGA1P29973 690 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 SLC16A2P36021 539 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 STAT3P40763 770 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 LRRC26Q2I0M4 334 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 CWC27Q6UX04 472 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 DPP9Q86TI2 863 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 TBC1D10CQ8IV04 446 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 C7orf61Q8IZ16 206 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 RBBP6Q7Z6E9 1792 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-203ENST00000469923 TMEM232C9JQI7 657 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 HOXC6P09630 235 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 GNAT2P19087 354 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 CNTN2Q02246 1040 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 ALX1Q15699 326 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 ZNF792Q3KQV3 632 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 LPAR1Q92633 364 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 MAML3Q96JK9 1138 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 APBA2Q99767 749 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
SHROOM3-203ENST00000469923 HELLSQ9NRZ9 838 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms