RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CYBAP13498 195 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 PLS1Q14651 629 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 C7orf61Q8IZ16 206 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 OSBP2Q969R2 916 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 ATG4CQ96DT6 458 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 PPP1R9AQ9ULJ8 1098 aa13.11□□□□□ -0.31
COL4A3-204ENST00000469504 DIS3Q9Y2L1 958 aaKnown RBP13.11□□□□□ -0.31
COL4A3-204ENST00000469504 MYH8P13535 1937 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
COL4A3-204ENST00000469504 CHGBP05060 677 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
COL4A3-204ENST00000469504 RASA1P20936 1047 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 CNGA1P29973 690 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 CYP2C19P33261 490 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 TDO2P48775 406 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 AAMPQ13685 434 aa13.1□□□□□ -0.31
COL4A3-204ENST00000469504 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-204ENST00000469504 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-204ENST00000469504 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 LAMA3Q16787 3333 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 VWA5AO00534 786 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 SEPT4O43236 478 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 STAT3P40763 770 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 KCTD2Q14681 263 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 TMEM132BQ14DG7 1078 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 CLEC10AQ8IUN9 316 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
COL4A3-204ENST00000469504 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 MKL1Q969V6 931 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL4A3-204ENST00000469504 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 RLFQ13129 1914 aa13.09□□□□□ -0.31
COL4A3-204ENST00000469504 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
COL4A3-204ENST00000469504 PLIN4Q96Q06 1357 aa13.08□□□□□ -0.31
COL4A3-204ENST00000469504 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 COBLO75128 1261 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 APPP05067 770 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 FDX1P10109 184 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 MX1P20591 662 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
COL4A3-204ENST00000469504 PDE4BQ07343 736 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 PRPF38AQ8NAV1 312 aaKnown RBP13.08□□□□□ -0.32
COL4A3-204ENST00000469504 MAML3Q96JK9 1138 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 MMP19Q99542 508 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
COL4A3-204ENST00000469504 ZNF214Q9UL59 606 aaPredicted RBP13.08□□□□□ -0.32
COL4A3-204ENST00000469504 IGKV6D-41A0A0C4DH26 115 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 F5H6K3 240 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 TTLL1O95922 423 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 KLRC3Q07444 240 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 GMCL1P1Q8NEA9 526 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 REPS2Q8NFH8 660 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-204ENST00000469504 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-204ENST00000469504 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-204ENST00000469504 PCDHB15Q9Y5E8 787 aa13.07□□□□□ -0.32
COL4A3-204ENST00000469504 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-204ENST00000469504 ALPK3Q96L96 1907 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 M0R2C6 588 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 RAD21O60216 631 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 NDUFB10O96000 172 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-204ENST00000469504 OAZ1P54368 228 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 C1orf53Q5VUE5 145 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 TSHZ3Q63HK5 1081 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL4A3-204ENST00000469504 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 NAPBQ9H115 298 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 FBXO28Q9NVF7 368 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 PRKAG2Q9UGJ0 569 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 FBXO40Q9UH90 709 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
COL4A3-204ENST00000469504 CTDP1Q9Y5B0 961 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-204ENST00000469504 ZBED4O75132 1171 aa13.05□□□□□ -0.32
COL4A3-204ENST00000469504 TSPY3P0CV98 308 aa13.05□□□□□ -0.32
COL4A3-204ENST00000469504 TSPY8P0CW00 308 aa13.05□□□□□ -0.32
COL4A3-204ENST00000469504 SYN1P17600 705 aa13.05□□□□□ -0.32
COL4A3-204ENST00000469504 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms