RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PITPNM1O00562 1244 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ADAMTS4O75173 837 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 VCAM1P19320 739 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 CERKLQ49MI3 558 aaPredicted RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 CCSAPQ6IQ19 270 aaPredicted RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 RAD50Q92878 1312 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 NAV1Q8NEY1 1877 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 PLXNA1Q9UIW2 1896 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 TRIM43BA6NCK2 446 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 CD4P01730 458 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 NBPF7P0C2Y1 421 aaPredicted RBP6.93□□□□□ -1.3
CXXC4-202ENST00000466963 ATXN8OSP0DMR3 200 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 ADCYAP1R1P41586 468 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 ACLYP53396 1101 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 PTPN5P54829 565 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 GIMAP6Q6P9H5 292 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 ZFPM1Q8IX07 1006 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 TSR2Q969E8 191 aaKnown RBP6.93□□□□□ -1.3
CXXC4-202ENST00000466963 TRIM43Q96BQ3 446 aaPredicted RBP6.93□□□□□ -1.3
CXXC4-202ENST00000466963 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 MMP19Q99542 508 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 MOV10L1Q9BXT6 1211 aaKnown RBP6.93□□□□□ -1.3
CXXC4-202ENST00000466963 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 TMX2Q9Y320 296 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 CNGA1P29973 690 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 PHKA1P46020 1223 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 MICALL1Q8N3F8 863 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 CRNKL1Q9BZJ0 848 aaKnown RBP6.93□□□□□ -1.3
CXXC4-202ENST00000466963 ATP8A2Q9NTI2 1148 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 RAI14Q9P0K7 980 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 DOCK3Q8IZD9 2030 aa6.93□□□□□ -1.3
CXXC4-202ENST00000466963 TLL1O43897 1013 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 CAND2O75155 1236 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 TRIM32Q13049 653 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 BFSP2Q13515 415 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 GRIN2CQ14957 1233 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 HLA-CQ95604 372 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 PORCNQ9H237 461 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 TXNRD2Q9NNW7 524 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 HMG20BQ9P0W2 317 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.92□□□□□ -1.3
CXXC4-202ENST00000466963 SLC4A7Q9Y6M7 1214 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 SNAP23O00161 211 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 G3BP1Q13283 466 aaKnown RBP eCLIP6.92□□□□□ -1.3
CXXC4-202ENST00000466963 PTPROQ16827 1216 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 ERMP1Q7Z2K6 904 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 RPAP3Q9H6T3 665 aaPredicted RBP6.92□□□□□ -1.3
CXXC4-202ENST00000466963 VCPKMTQ9H867 229 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CXXC4-202ENST00000466963 ZNF865P0CJ78 1059 aaPredicted RBP6.92□□□□□ -1.3
CXXC4-202ENST00000466963 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 SLC4A10Q6U841 1118 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 SAMD3Q8N6K7 520 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 TRPV1Q8NER1 839 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 CAGE1Q8TC20 777 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 KANSL2Q9H9L4 492 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 VTA1Q9NP79 307 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 ABCF2Q9UG63 623 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 JAG2Q9Y219 1238 aa6.92□□□□□ -1.3
CXXC4-202ENST00000466963 DNAJC25-GNG10A0A024R161 153 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 MCAMP43121 646 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 GABPAQ06546 454 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 PICALMQ13492 652 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 ZSCAN25Q6NSZ9 544 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 SESTD1Q86VW0 696 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 MORC4Q8TE76 937 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 PAGR1Q9BTK6 254 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 TEX13BQ9BXU2 312 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 F6X3S4 739 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 FAM160B2Q86V87 743 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 SNX27Q96L92 541 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 NOP58Q9Y2X3 529 aaKnown RBP6.91□□□□□ -1.3
CXXC4-202ENST00000466963 TANC1Q9C0D5 1861 aa6.91□□□□□ -1.3
CXXC4-202ENST00000466963 ZBED4O75132 1171 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 RGS20O76081 388 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 ERCC3P19447 782 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 CCL14Q16627 93 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 Q3C1V9 767 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 MS4A1P11836 297 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 TTC39AQ5SRH9 613 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
CXXC4-202ENST00000466963 NFRKBQ6P4R8 1299 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 AP5M1Q9H0R1 490 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 NYAP2Q9P242 653 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
CXXC4-202ENST00000466963 GREB1LQ9C091 1923 aaPredicted RBP6.9□□□□□ -1.31
CXXC4-202ENST00000466963 MYH8P13535 1937 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms