RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM178BQ8IXR5 827 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 SMYD4Q8IYR2 804 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-212ENST00000461608 CELF2-AS1Q8N7Q2 184 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 PI4K2BQ8TCG2 481 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 ACSS3Q9H6R3 686 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 LGR6Q9HBX8 967 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 SSU72Q9NP77 194 aaKnown RBP4.47□□□□□ -1.69
HDAC6-212ENST00000461608 CSADQ9Y600 493 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 IQCA1LA6NCM1 817 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 AGRPO00253 132 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 GJB6O95452 261 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 SLC7A5Q01650 507 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 MTERF2Q49AM1 385 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 C6orf15Q6UXA7 325 aaPredicted RBP4.46□□□□□ -1.7
HDAC6-212ENST00000461608 UNC5AQ6ZN44 842 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 ARHGAP27Q6ZUM4 889 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 JAZF1Q86VZ6 243 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 SYNPOQ8N3V7 929 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 ISL2Q96A47 359 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 FOXQ1Q9C009 403 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 TNKS2Q9H2K2 1166 aa4.46□□□□□ -1.7
HDAC6-212ENST00000461608 ZNF214Q9UL59 606 aaPredicted RBP4.46□□□□□ -1.7
HDAC6-212ENST00000461608 DNAJA2O60884 412 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 RNGTTO60942 597 aaKnown RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 CLEC3AO75596 197 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 NEFMP07197 916 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ZSCAN22P10073 491 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ACRP10323 421 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 HCLS1P14317 486 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 GBP1P32455 592 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ETV3P41162 512 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 PMS1P54277 932 aaKnown RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 SLBPQ14493 270 aaKnown RBP eCLIP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 LONRF2Q1L5Z9 754 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 CYP27C1Q4G0S4 372 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 C2orf27AQ580R0 203 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 PRAMEF13Q5VWM6 474 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ARMCX6Q7L4S7 300 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 SPRED2Q7Z698 418 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 LRRC56Q8IYG6 542 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 LRRC47Q8N1G4 583 aaKnown RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 CRACR2BQ8N4Y2 399 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 THAP3Q8WTV1 239 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 SLC9A7Q96T83 725 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ASPNQ9BXN1 380 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 ANTXR1Q9H6X2 564 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 SUCOQ9UBS9 1254 aaKnown RBP4.45□□□□□ -1.7
HDAC6-212ENST00000461608 RAPGEFL1Q9UHV5 662 aa4.45□□□□□ -1.7
HDAC6-212ENST00000461608 CCDC85CA6NKD9 419 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 CHURC1-FNTBB4DL54 471 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 HSP90B1P14625 803 aaKnown RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 CYP7A1P22680 504 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 RUFY4Q6ZNE9 571 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 HOMER1Q86YM7 354 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 NLGN1Q8N2Q7 840 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 BCL7CQ8WUZ0 217 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 APPBP2Q92624 585 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 SGSM3Q96HU1 749 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 SLC6A18Q96N87 628 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 GBP3Q9H0R5 595 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 SLKQ9H2G2 1235 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 FBRSQ9HAH7 460 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 ST7Q9NRC1 585 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 PRR13Q9NZ81 148 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 PRKAB1Q9Y478 270 aa4.44□□□□□ -1.7
HDAC6-212ENST00000461608 MRPL42Q9Y6G3 142 aaKnown RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-212ENST00000461608 CCDC163A0A0D9SF12 145 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 ANKRD34BA5PLL1 514 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 UPK3BL1B0FP48 263 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 UPK3BL2E5RIL1 263 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 NFIBO00712 420 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 SUSD5O60279 629 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 CDC45O75419 566 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 CD96P40200 585 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 BUD31P41223 144 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-212ENST00000461608 BNIP3Q12983 259 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 CDK5R2Q13319 367 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 ZYXQ15942 572 aaKnown RBP4.43□□□□□ -1.7
HDAC6-212ENST00000461608 KCNMB1Q16558 191 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 NKG7Q16617 165 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 MLANAQ16655 118 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 GNPTABQ3T906 1256 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 PLEKHG4Q58EX7 1191 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 EGFLAMQ63HQ2 1017 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 KIAA1211LQ6NV74 962 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 ZSWIM2Q8NEG5 633 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 SH3TC2Q8TF17 1288 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 RNF141Q8WVD5 230 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 KLHL6Q8WZ60 621 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 TMEM260Q9NX78 707 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 DAGLAQ9Y4D2 1042 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 CARMIL2Q6F5E8 1435 aa4.43□□□□□ -1.7
HDAC6-212ENST00000461608 FAM221BA6H8Z2 402 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 B2RBV5 119 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 RBAK-RBAKDNI3L0D1 243 aa4.42□□□□□ -1.7
HDAC6-212ENST00000461608 TSPAN15O95858 294 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms