RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 PTPREP23469 700 aa21.96■■□□□ 1.11
COL9A2-205ENST00000461118 MDM2Q00987 491 aaPredicted RBP21.96■■□□□ 1.11
COL9A2-205ENST00000461118 FEZ1Q99689 392 aa21.96■■□□□ 1.11
COL9A2-205ENST00000461118 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
COL9A2-205ENST00000461118 ROBO3Q96MS0 1386 aa21.96■■□□□ 1.11
COL9A2-205ENST00000461118 SLC15A5A6NIM6 579 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 AKR1B1P15121 316 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 TDO2P48775 406 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 GRB14Q14449 540 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 CCAR1Q8IX12 1150 aaKnown RBP21.95■■□□□ 1.1
COL9A2-205ENST00000461118 TRPV1Q8NER1 839 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 NPLOC4Q8TAT6 608 aa21.95■■□□□ 1.1
COL9A2-205ENST00000461118 A0A1W2PRG0 241 aa21.94■■□□□ 1.1
COL9A2-205ENST00000461118 SPDYE16A6NNV3 312 aaPredicted RBP21.94■■□□□ 1.1
COL9A2-205ENST00000461118 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
COL9A2-205ENST00000461118 TRIM6-TRIM34B2RNG4 842 aa21.94■■□□□ 1.1
COL9A2-205ENST00000461118 POTEB2H3BUK9 544 aa21.94■■□□□ 1.1
COL9A2-205ENST00000461118 SIAH1Q8IUQ4 282 aa21.94■■□□□ 1.1
COL9A2-205ENST00000461118 COL11A1P12107 1806 aaPredicted RBP21.93■■□□□ 1.1
COL9A2-205ENST00000461118 CCNA1P78396 465 aa21.93■■□□□ 1.1
COL9A2-205ENST00000461118 EYSQ5T1H1 3165 aa21.93■■□□□ 1.1
COL9A2-205ENST00000461118 DDX20Q9UHI6 824 aaKnown RBP21.93■■□□□ 1.1
COL9A2-205ENST00000461118 FOXP2O15409 715 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 MCMDC2Q4G0Z9 681 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 CCDC129Q6ZRS4 1044 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 LPAR1Q92633 364 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 RILPL2Q969X0 211 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 SENP6Q9GZR1 1112 aaPredicted RBP21.92■■□□□ 1.1
COL9A2-205ENST00000461118 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 ZNF287Q9HBT7 754 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 TMX2Q9Y320 296 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 SMCHD1A6NHR9 2005 aa21.92■■□□□ 1.1
COL9A2-205ENST00000461118 RASA1P20936 1047 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 CYP2C19P33261 490 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 MFSD14CQ5VZR4 134 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 GUCD1Q96NT3 240 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 NAPBQ9H115 298 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 RPAP3Q9H6T3 665 aaPredicted RBP21.91■■□□□ 1.1
COL9A2-205ENST00000461118 MKNK2Q9HBH9 465 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 ARHGEF10LQ9HCE6 1279 aa21.91■■□□□ 1.1
COL9A2-205ENST00000461118 A0A0D9SFI3 127 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 CYBAP13498 195 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 PDE4AP27815 886 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 ICA1Q05084 483 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 ALX1Q15699 326 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 FAM109BQ6ICB4 259 aaPredicted RBP21.9■■□□□ 1.1
COL9A2-205ENST00000461118 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.9■■□□□ 1.1
COL9A2-205ENST00000461118 SH2D4AQ9H788 454 aa21.9■■□□□ 1.1
COL9A2-205ENST00000461118 DNM1LO00429 736 aa21.89■■□□□ 1.09
COL9A2-205ENST00000461118 MSCO60682 206 aa21.89■■□□□ 1.09
COL9A2-205ENST00000461118 SDSP20132 328 aa21.89■■□□□ 1.09
COL9A2-205ENST00000461118 NMIQ13287 307 aaPredicted RBP21.89■■□□□ 1.09
COL9A2-205ENST00000461118 WDR78Q5VTH9 848 aa21.89■■□□□ 1.09
COL9A2-205ENST00000461118 CWC22Q9HCG8 908 aaKnown RBP21.89■■□□□ 1.09
COL9A2-205ENST00000461118 PLXNA1Q9UIW2 1896 aa21.89■■□□□ 1.09
COL9A2-205ENST00000461118 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
COL9A2-205ENST00000461118 ATN1P54259 1190 aaPredicted RBP21.88■■□□□ 1.09
COL9A2-205ENST00000461118 ATP2B2Q01814 1243 aa21.88■■□□□ 1.09
COL9A2-205ENST00000461118 PPARAQ07869 468 aa21.88■■□□□ 1.09
COL9A2-205ENST00000461118 KIAA1755Q5JYT7 1200 aa21.88■■□□□ 1.09
COL9A2-205ENST00000461118 VPS53Q5VIR6 699 aa21.88■■□□□ 1.09
COL9A2-205ENST00000461118 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
COL9A2-205ENST00000461118 MOV10L1Q9BXT6 1211 aaKnown RBP21.88■■□□□ 1.09
COL9A2-205ENST00000461118 SLC3A2P08195 630 aaKnown RBP21.87■■□□□ 1.09
COL9A2-205ENST00000461118 EEF2P13639 858 aaKnown RBP21.87■■□□□ 1.09
COL9A2-205ENST00000461118 CNGA1P29973 690 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 PDE4BQ07343 736 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 ZNF444Q8N0Y2 327 aaPredicted RBP21.87■■□□□ 1.09
COL9A2-205ENST00000461118 STK11IPQ8N1F8 1099 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 VCPKMTQ9H867 229 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 ANAPC4Q9UJX5 808 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 IVNS1ABPQ9Y6Y0 642 aa21.87■■□□□ 1.09
COL9A2-205ENST00000461118 HIP1O00291 1037 aa21.86■■□□□ 1.09
COL9A2-205ENST00000461118 RTP1P59025 263 aa21.86■■□□□ 1.09
COL9A2-205ENST00000461118 OLFML2BQ68BL8 750 aa21.86■■□□□ 1.09
COL9A2-205ENST00000461118 NYAP2Q9P242 653 aa21.86■■□□□ 1.09
COL9A2-205ENST00000461118 CDH23Q9H251 3354 aa21.86■■□□□ 1.09
COL9A2-205ENST00000461118 VCANP13611 3396 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 IGKV6D-41A0A0C4DH26 115 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 COBLO75128 1261 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 HSPD1P10809 573 aaKnown RBP21.85■■□□□ 1.09
COL9A2-205ENST00000461118 ADORA2AP29274 412 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 MFAP1P55081 439 aaKnown RBP21.85■■□□□ 1.09
COL9A2-205ENST00000461118 COG2Q14746 738 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 GJC2Q5T442 439 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-205ENST00000461118 ZNF589Q86UQ0 364 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-205ENST00000461118 COL25A1Q9BXS0 654 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-205ENST00000461118 HOXC10Q9NYD6 342 aa21.85■■□□□ 1.09
COL9A2-205ENST00000461118 ZMYM6O95789 1325 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 CCDC171Q6TFL3 1326 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 PRDM1O75626 825 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 FGAP02671 866 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 SNX17Q15036 470 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 TTC22Q5TAA0 569 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 SLC39A5Q6ZMH5 540 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 SPATC1LQ9H0A9 340 aa21.84■■□□□ 1.09
COL9A2-205ENST00000461118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL9A2-205ENST00000461118 PRUNE2Q8WUY3 3088 aa21.83■■□□□ 1.09
COL9A2-205ENST00000461118 WDR46O15213 610 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms