RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 SLC20A2Q08357 652 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 NCAPHQ15003 741 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 ATL3Q6DD88 541 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 FAM43BQ6ZT52 329 aaPredicted RBP10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 HPS3Q969F9 1004 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 SMARCE1Q969G3 411 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 PIGSQ96S52 555 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 CCDC94Q9BW85 323 aaPredicted RBP10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 BRMS1Q9HCU9 246 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 USP40Q9NVE5 1235 aa10.27□□□□□ -0.76
MCF2L2-204ENST00000459750 BTAF1O14981 1849 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 FAM170AA1A519 330 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 PTPREP23469 700 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 NAPAP54920 295 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 NPY5RQ15761 445 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 WWC2Q6AWC2 1192 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 FOXP1Q9H334 677 aaPredicted RBP10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 POLD4Q9HCU8 107 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 CGNQ9P2M7 1197 aaKnown RBP10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 FLT1P17948 1338 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 AKR1B1P15121 316 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 IL17AQ16552 155 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 ANAPC4Q9UJX5 808 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 DAGLAQ9Y4D2 1042 aa10.27□□□□□ -0.77
MCF2L2-204ENST00000459750 PRPF3O43395 683 aaKnown RBP10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 PPP6R2O75170 966 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 HPSEQ9Y251 543 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 C4AP0C0L4 1744 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 CUL4BQ13620 913 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 CCDC96Q2M329 555 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 TRMT1LQ7Z2T5 733 aaKnown RBP10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 SPICE1Q8N0Z3 855 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 PLCD4Q9BRC7 762 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 MAD2L2Q9UI95 211 aa10.26□□□□□ -0.77
MCF2L2-204ENST00000459750 GDF11O95390 407 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 RAD51AP2Q09MP3 1159 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 IKQ13123 557 aaPredicted RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 UBE2SQ16763 222 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 NUP88Q99567 741 aaPredicted RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 DESI2Q9BSY9 194 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 HSD3B7Q9H2F3 369 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 CACNA1SQ13698 1873 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 CCNT1O60563 726 aaKnown RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 MYL5Q02045 173 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 SLC30A10Q6XR72 485 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 BLIDQ8IZY5 108 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 MED15Q96RN5 788 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 GDAQ9Y2T3 454 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 TNRC6CQ9HCJ0 1690 aaKnown RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 SEMA3EO15041 775 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 TEX33O43247 280 aa10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 SRPRBQ9Y5M8 271 aaKnown RBP10.25□□□□□ -0.77
MCF2L2-204ENST00000459750 CLRN2A0PK11 232 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 KIF5BP33176 963 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 RHBDL3P58872 404 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 TPM4P67936 248 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 IRX5P78411 483 aaPredicted RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 DPYDQ12882 1025 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 AOC3Q16853 763 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 CTNND2Q9UQB3 1225 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 STK36Q9NRP7 1315 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 TRIM49BA6NDI0 452 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 ORC4O43929 436 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 LDHCP07864 332 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 TECP42680 631 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 TXKP42681 527 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 RRAGBQ5VZM2 374 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 PAGE5Q96GU1 130 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 TMX4Q9H1E5 349 aaPredicted RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 VPS16Q9H269 839 aa10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 RBM28Q9NW13 759 aaKnown RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
MCF2L2-204ENST00000459750 C21orf2O43822 256 aa10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 CLSTN1O94985 981 aa10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 PARP1P09874 1014 aaKnown RBP10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 TNNI2P48788 182 aa10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 GSTO1P78417 241 aa10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 C2CD5Q86YS7 1000 aa10.23□□□□□ -0.77
MCF2L2-204ENST00000459750 IRS2Q9Y4H2 1338 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms